NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
CONPAIR_PILEUP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33)

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Task Info

Status: succeeded
Hash: 635cafd90090
Process: NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: a0/110522
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/1105220fc83795ac7bd430010256b5
Native ID: nf-a01105220fc83795ac7bd430010256b5-e12c9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 842.2 MB / 2.0 GB
Process I/O (rchar / wchar): 14.0 GB / 338.2 MB
Disk I/O (read / write): 28.7 GB / 338.4 MB
Host: i-0c0dc92ac076c3c84 ( spot)

Runtime

Submitted: Jan 27, 2026 4:24:35 PM
Completed: Jan 27, 2026 4:34:23 PM
Total Duration: 9m 47s

Phases

Queue: 1m 54s
Execution: 4m 41s
Stage/Unstage: 3m 11s

Attempt 3

Execution

Status: succeeded
Hash: 00/67d6f6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/00/67d6f6a632e6cd223f8bd0e2fc4c20
Native ID: nf-0067d6f6a632e6cd223f8bd0e2fc4c20-3b3b8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 2
Memory (peak / alloc): 996.1 MB / 4.0 GB
Process I/O (rchar / wchar): 19.3 GB / 338.2 MB
Disk I/O (read / write): 35.4 GB / 338.6 MB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 3:01:24 PM
Completed: Jan 27, 2026 3:11:37 PM
Total Duration: 10m 12s

Phases

Queue: 38s
Execution: 5m 31s
Stage/Unstage: 4m 2s

Attempt 2

Execution

Status: failed
Hash: 15/a38c2f
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/a38c2fdd46104c3434b4f0abbd848f
Native ID: nf-15a38c2fdd46104c3434b4f0abbd848f-5f4a6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 1
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0e60f6cbe90fbc6eb ( spot)

Runtime

Submitted: Jan 27, 2026 2:53:47 PM
Completed: Jan 27, 2026 3:01:19 PM
Total Duration: 7m 31s

Phases

Queue: 43s
Execution: 6m 48s
Stage/Unstage: 0s

Attempt 1

Execution

Status: succeeded
Hash: 5e/8c752b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/rsrivas9784/conpair:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/8c752b7f8677d45109ec0c9567b5d3
Native ID: nf-5e8c752b7f8677d45109ec0c9567b5d3-aa2f8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 781.7 MB / 2.0 GB
Process I/O (rchar / wchar): 16.4 GB / 321.9 MB
Disk I/O (read / write): 30.5 GB / 322.1 MB
Host: i-090e07fa0575ee8ce ( spot)

Runtime

Submitted: Jan 27, 2026 2:20:18 AM
Completed: Jan 27, 2026 2:28:06 AM
Total Duration: 7m 47s

Phases

Queue: 32s
Execution: 4m 21s
Stage/Unstage: 2m 53s