NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
TABIX_BGZIPTABIX (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: 650c00adbe29
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 50/0360d1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/0360d12d861a67ebb05889c3e7e591
Native ID: nf-500360d12d861a67ebb05889c3e7e591-c5345

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 6.2 MB / 1.0 GB
Process I/O (rchar / wchar): 279.9 MB / 45.3 MB
Disk I/O (read / write): - / 45.3 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 28, 2026 2:48:11 AM
Completed: Jan 28, 2026 2:48:21 AM
Total Duration: 9s

Phases

Queue: 3s
Execution: 3s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: df/8a035f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/8a035fc9e87ba0c9ed686a76bb5be8
Native ID: nf-df8a035fc9e87ba0c9ed686a76bb5be8-15b50

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 16.1 MB / 1.0 GB
Process I/O (rchar / wchar): 959.1 MB / 104.0 MB
Disk I/O (read / write): - / 104.0 MB
Host: i-006df8f60d49e9929 ( spot)

Runtime

Submitted: Jan 27, 2026 4:52:04 PM
Completed: Jan 27, 2026 4:52:23 PM
Total Duration: 18s

Phases

Queue: 3s
Execution: 9s
Stage/Unstage: 6s

Attempt 2

Execution

Status: succeeded
Hash: 34/558780
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/5587803342726228a2b6720f263658
Native ID: nf-345587803342726228a2b6720f263658-19159

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 6.1 MB / 1.0 GB
Process I/O (rchar / wchar): 9.0 MB / 1.7 MB
Disk I/O (read / write): - / 1.7 MB
Host: i-03bea117c78d6c928 ( spot)

Runtime

Submitted: Jan 27, 2026 3:24:08 PM
Completed: Jan 27, 2026 3:24:14 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: df/b21860
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/b2186032e2ff58487b8db9238ccfaf
Native ID: nf-dfb2186032e2ff58487b8db9238ccfaf-33e26

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 3.2 MB / 2.0 GB
Process I/O (rchar / wchar): 366.9 KB / 36.8 KB
Disk I/O (read / write): - / 40.0 KB
Host: i-01231a6aac0abc374 ( spot)

Runtime

Submitted: Jan 27, 2026 3:07:10 AM
Completed: Jan 27, 2026 3:07:16 AM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -