NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
TABIX_TABIX (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller)

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Task Info

Status: succeeded
Hash: 652e7176edc7
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 88/94f3a7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/94f3a77fe2ac9a2c8a54c4101c98ab
Native ID: nf-8894f3a77fe2ac9a2c8a54c4101c98ab-93abb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.8 / 1
Memory (peak / alloc): 6.4 MB / 1.0 GB
Process I/O (rchar / wchar): 104.7 MB / 1.2 MB
Disk I/O (read / write): - / 1.2 MB
Host: i-0892f51add97b57fe ( spot)

Runtime

Submitted: Jan 27, 2026 5:20:13 PM
Completed: Jan 27, 2026 5:20:21 PM
Total Duration: 7s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 4

Execution

Status: succeeded - cached
Hash: 76/c134e1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/76/c134e15c654919e70736f8b5bbc552
Native ID: nf-76c134e15c654919e70736f8b5bbc552-32ebb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.8 / 1
Memory (peak / alloc): 6.6 MB / 1.0 GB
Process I/O (rchar / wchar): 62.8 MB / 753.6 KB
Disk I/O (read / write): - / 756.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 7:06:52 PM
Completed: Jan 27, 2026 7:06:58 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 1s

Attempt 3

Execution

Status: succeeded
Hash: 19/b792dd
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/b792ddc5d0fbfafc70c28a1dd4c28c
Native ID: nf-19b792ddc5d0fbfafc70c28a1dd4c28c-53dd4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.8 / 1
Memory (peak / alloc): 6.3 MB / 1.0 GB
Process I/O (rchar / wchar): 127.7 MB / 1.4 MB
Disk I/O (read / write): - / 1.4 MB
Host: i-0c82858a27577a8f8 ( spot)

Runtime

Submitted: Jan 27, 2026 4:57:14 PM
Completed: Jan 27, 2026 4:57:23 PM
Total Duration: 8s

Phases

Queue: 5s
Execution: 1s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 80/75a163
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/75a1631b1fe0eb3b8eda9ebb5cb063
Native ID: nf-8075a1631b1fe0eb3b8eda9ebb5cb063-3cbf0

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 3.2 MB / 1.0 GB
Process I/O (rchar / wchar): 144.2 KB / 8.6 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0675a2f490e8f1b97 ( spot)

Runtime

Submitted: Jan 27, 2026 3:11:42 PM
Completed: Jan 27, 2026 3:11:47 PM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 2a/9e96f0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/9e96f038d479ae996b8583d7f5f5d6
Native ID: nf-2a9e96f038d479ae996b8583d7f5f5d6-19a48

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 8.7 MB / 2.0 GB
Process I/O (rchar / wchar): 1.2 MB / 27.2 KB
Disk I/O (read / write): - / 32.0 KB
Host: i-09d9ec7de91287af8 ( spot)

Runtime

Submitted: Jan 27, 2026 2:56:39 AM
Completed: Jan 27, 2026 2:56:44 AM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -