NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller)

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Task Info

Status: succeeded
Hash: 6570ece50f12
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 14/017061
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/017061b3ee850460f1480dfae04d9f
Native ID: nf-14017061b3ee850460f1480dfae04d9f-9fec4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.3 / 1
Memory (peak / alloc): 36.8 MB / 1.0 GB
Process I/O (rchar / wchar): 59.3 MB / 31.3 MB
Disk I/O (read / write): - / 31.3 MB
Host: i-0c7cad1aeec3c3598 ( spot)

Runtime

Submitted: Jan 27, 2026 5:04:54 PM
Completed: Jan 27, 2026 5:05:05 PM
Total Duration: 10s

Phases

Queue: 5s
Execution: 3s
Stage/Unstage: 2s

Attempt 4

Execution

Status: succeeded - cached
Hash: 87/bf555e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/bf555e51808dd6a87589a1f534da18
Native ID: nf-87bf555e51808dd6a87589a1f534da18-af7f1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 8.5 / 1
Memory (peak / alloc): 37.2 MB / 1.0 GB
Process I/O (rchar / wchar): 68.6 MB / 35.3 MB
Disk I/O (read / write): - / 35.3 MB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 6:58:22 PM
Completed: Jan 27, 2026 6:58:31 PM
Total Duration: 8s

Phases

Queue: 3s
Execution: 3s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: d9/441c6b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/441c6b1f8fc5f0c668586539f2288d
Native ID: nf-d9441c6b1f8fc5f0c668586539f2288d-aa78f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.7 / 1
Memory (peak / alloc): 37.2 MB / 1.0 GB
Process I/O (rchar / wchar): 51.2 MB / 27.0 MB
Disk I/O (read / write): 24.0 KB / 27.1 MB
Host: i-060fd6816157acc2f ( spot)

Runtime

Submitted: Jan 27, 2026 4:46:25 PM
Completed: Jan 27, 2026 4:46:36 PM
Total Duration: 10s

Phases

Queue: 5s
Execution: 3s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 6a/7f9e74
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/7f9e74bc0dbd87b0e6dd86bf653da4
Native ID: nf-6a7f9e74bc0dbd87b0e6dd86bf653da4-02ad8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 48.7 / 1
Memory (peak / alloc): 16.3 MB / 1.0 GB
Process I/O (rchar / wchar): 179.7 KB / 25.3 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 3:08:59 PM
Completed: Jan 27, 2026 3:09:08 PM
Total Duration: 8s

Phases

Queue: 6s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 9b/4310bc
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/4310bcc0cc3d81e8ea204ff56285b7
Native ID: nf-9b4310bcc0cc3d81e8ea204ff56285b7-45c38

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.5 / 1
Memory (peak / alloc): 12.4 MB / 2.0 GB
Process I/O (rchar / wchar): 1013.4 KB / 478.1 KB
Disk I/O (read / write): - / 484.0 KB
Host: i-062fc2a07c42465c7 ( spot)

Runtime

Submitted: Jan 27, 2026 2:53:22 AM
Completed: Jan 27, 2026 2:53:31 AM
Total Duration: 8s

Phases

Queue: 6s
Execution: -
Stage/Unstage: -