NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
VCFTOOLS_TSTV_COUNT (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

Login

Task Info

Status: succeeded
Hash: 6653c9f1a36b
Process: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 5

Attempt 5

Execution

Status: succeeded
Hash: 6d/b5b227
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6d/b5b227ad80838ea3b876b036613574
Native ID: nf-6db5b227ad80838ea3b876b036613574-57ba9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.6 MB / 1.0 GB
Process I/O (rchar / wchar): 40.5 MB / 2.3 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0f6438535f34a7c9a ( spot)

Runtime

Submitted: Jan 28, 2026 12:54:10 PM
Completed: Jan 28, 2026 12:54:21 PM
Total Duration: 10s

Phases

Queue: 6s
Execution: 1s
Stage/Unstage: 3s

Attempt 4

Execution

Status: succeeded
Hash: 17/6b41ad
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/6b41ad040600457b9038cb7a606626
Native ID: nf-176b41ad040600457b9038cb7a606626-30d37

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.5 MB / 1.0 GB
Process I/O (rchar / wchar): 218.5 MB / 2.1 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 27, 2026 11:10:40 PM
Completed: Jan 27, 2026 11:11:03 PM
Total Duration: 22s

Phases

Queue: 4s
Execution: 14s
Stage/Unstage: 4s

Attempt 3

Execution

Status: succeeded
Hash: 25/8517ce
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/8517ce814a75dc651c643b734a3dc1
Native ID: nf-258517ce814a75dc651c643b734a3dc1-71be8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 13.7 MB / 1.0 GB
Process I/O (rchar / wchar): 1.1 MB / 2.5 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0766e96e580fccfd8 ( spot)

Runtime

Submitted: Jan 27, 2026 4:48:45 PM
Completed: Jan 27, 2026 4:48:52 PM
Total Duration: 6s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: 2c/ac5fb9
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/ac5fb97b1078037a72e877ceebcbad
Native ID: nf-2cac5fb97b1078037a72e877ceebcbad-270f5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.5 MB / 1.0 GB
Process I/O (rchar / wchar): 24.7 MB / 2.4 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0ed8dea3ccd31f222 ( spot)

Runtime

Submitted: Jan 27, 2026 3:17:31 PM
Completed: Jan 27, 2026 3:17:39 PM
Total Duration: 7s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: 39/19de41
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/19de4112127a24ef9a8bb4bb86f329
Native ID: nf-3919de4112127a24ef9a8bb4bb86f329-c6821

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 10.3 MB / 2.0 GB
Process I/O (rchar / wchar): 5.2 MB / 2.0 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0ad6dffc43f14da19 ( spot)

Runtime

Submitted: Jan 27, 2026 3:02:18 AM
Completed: Jan 27, 2026 3:02:27 AM
Total Duration: 8s

Phases

Queue: 6s
Execution: -
Stage/Unstage: -