NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_SUMMARY (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
VCFTOOLS_SUMMARY (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: 666cef4aa6bc
Process: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_SUMMARY
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 5

Attempt 5

Execution

Status: succeeded
Hash: ea/42de25
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/42de25f0653dbd5f9d5ec21ded06aa
Native ID: nf-ea42de25f0653dbd5f9d5ec21ded06aa-bbb90

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.6 MB / 1.0 GB
Process I/O (rchar / wchar): 40.5 MB / 61.7 KB
Disk I/O (read / write): - / 68.0 KB
Host: i-0f6438535f34a7c9a ( spot)

Runtime

Submitted: Jan 28, 2026 12:54:10 PM
Completed: Jan 28, 2026 12:54:21 PM
Total Duration: 10s

Phases

Queue: 6s
Execution: 1s
Stage/Unstage: 3s

Attempt 4

Execution

Status: succeeded
Hash: b2/6775bc
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/6775bc0d5f56d41c786add812a01d6
Native ID: nf-b26775bc0d5f56d41c786add812a01d6-46b05

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.9 MB / 1.0 GB
Process I/O (rchar / wchar): 218.5 MB / 103.1 KB
Disk I/O (read / write): - / 112.0 KB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 27, 2026 11:10:40 PM
Completed: Jan 27, 2026 11:11:03 PM
Total Duration: 22s

Phases

Queue: 4s
Execution: 14s
Stage/Unstage: 4s

Attempt 3

Execution

Status: succeeded
Hash: 2a/8dfce0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/8dfce00b2ac3a694d836da0db75cd5
Native ID: nf-2a8dfce00b2ac3a694d836da0db75cd5-25905

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.3 MB / 1.0 GB
Process I/O (rchar / wchar): 1.1 MB / 2.6 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:48:45 PM
Completed: Jan 27, 2026 4:48:51 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: 54/cfbc01
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/cfbc0134426c0fc97f3506cb4417fb
Native ID: nf-54cfbc0134426c0fc97f3506cb4417fb-08e1b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.6 MB / 1.0 GB
Process I/O (rchar / wchar): 24.7 MB / 2.5 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0520b16938838aa26 ( spot)

Runtime

Submitted: Jan 27, 2026 3:17:31 PM
Completed: Jan 27, 2026 3:17:38 PM
Total Duration: 6s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 96/38178d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/38178dbec51f578ee0353f006ce972
Native ID: nf-9638178dbec51f578ee0353f006ce972-535cc

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 9.8 MB / 2.0 GB
Process I/O (rchar / wchar): 5.2 MB / 47.5 KB
Disk I/O (read / write): - / 56.0 KB
Host: i-09f8d25ec9a2a9943 ( spot)

Runtime

Submitted: Jan 27, 2026 3:02:19 AM
Completed: Jan 27, 2026 3:02:29 AM
Total Duration: 9s

Phases

Queue: 6s
Execution: -
Stage/Unstage: -