NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper)

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Task Info

Status: succeeded
Hash: 6c00ebeb5cf5
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 22/7dcc89
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/7dcc898976f918ffd6d1dcc701a59d
Native ID: nf-227dcc898976f918ffd6d1dcc701a59d-108c9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 1
Memory (peak / alloc): 388.5 MB / 1.0 GB
Process I/O (rchar / wchar): 88.5 MB / 27.0 MB
Disk I/O (read / write): - / 27.0 MB
Host: i-0f175a980ffbd2986 ( spot)

Runtime

Submitted: Jan 27, 2026 4:46:06 PM
Completed: Jan 27, 2026 4:46:18 PM
Total Duration: 11s

Phases

Queue: 3s
Execution: 5s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: 04/fffdf7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/fffdf73ce950ea3b6d1f3f49318b99
Native ID: nf-04fffdf73ce950ea3b6d1f3f49318b99-c4450

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 8.3 / 1
Memory (peak / alloc): 307.1 MB / 1.0 GB
Process I/O (rchar / wchar): 38.9 MB / 117.9 KB
Disk I/O (read / write): - / 136.0 KB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:44:14 PM
Completed: Jan 27, 2026 4:44:23 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 5e/dc362e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/dc362eed3df06caa89470f3daee8fa
Native ID: nf-5edc362eed3df06caa89470f3daee8fa-d6941

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.2 / 1
Memory (peak / alloc): 301.7 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 34.4 KB
Disk I/O (read / write): - / 44.0 KB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 3:08:45 PM
Completed: Jan 27, 2026 3:08:54 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 5f/1c46cb
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/1c46cb693156e56a1b1944d8014ae0
Native ID: nf-5f1c46cb693156e56a1b1944d8014ae0-b02da

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.6 / 1
Memory (peak / alloc): 276.2 MB / 2.0 GB
Process I/O (rchar / wchar): 41.9 MB / 1.8 MB
Disk I/O (read / write): - / 1.8 MB
Host: i-09db62cc8a936d853 ( spot)

Runtime

Submitted: Jan 27, 2026 2:28:08 AM
Completed: Jan 27, 2026 2:28:17 AM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s