NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: 6ebd60a433f3
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 5

Attempt 5

Execution

Status: succeeded
Hash: a0/e7a098
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/e7a0988e6aded6f43b2dd7020a4d5f
Native ID: nf-a0e7a0988e6aded6f43b2dd7020a4d5f-b7379

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.6 / 1
Memory (peak / alloc): 35.0 MB / 1.0 GB
Process I/O (rchar / wchar): 68.7 MB / 35.3 MB
Disk I/O (read / write): - / 35.3 MB
Host: i-0f6438535f34a7c9a ( spot)

Runtime

Submitted: Jan 28, 2026 12:54:50 PM
Completed: Jan 28, 2026 12:54:59 PM
Total Duration: 8s

Phases

Queue: 2s
Execution: 4s
Stage/Unstage: 2s

Attempt 4

Execution

Status: succeeded
Hash: 65/8d13ba
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/8d13baedb25bcb77e2888382656472
Native ID: nf-658d13baedb25bcb77e2888382656472-997ae

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.6 / 1
Memory (peak / alloc): 43.2 MB / 1.0 GB
Process I/O (rchar / wchar): 427.9 MB / 216.2 MB
Disk I/O (read / write): - / 216.4 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 27, 2026 11:12:00 PM
Completed: Jan 27, 2026 11:12:29 PM
Total Duration: 28s

Phases

Queue: 2s
Execution: 22s
Stage/Unstage: 4s

Attempt 3

Execution

Status: succeeded
Hash: 0f/4715ca
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/4715cad1add96b6ef4db7d929f3e6d
Native ID: nf-0f4715cad1add96b6ef4db7d929f3e6d-1d7ae

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 71.7 / 1
Memory (peak / alloc): 16.0 MB / 1.0 GB
Process I/O (rchar / wchar): 2.0 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-045a2002736752e00 ( spot)

Runtime

Submitted: Jan 27, 2026 4:49:25 PM
Completed: Jan 27, 2026 4:49:34 PM
Total Duration: 8s

Phases

Queue: 7s
Execution: 1s
Stage/Unstage: 0s

Attempt 2

Execution

Status: succeeded
Hash: 8f/87bd6e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/87bd6e384867feccdb4fbbd5dac197
Native ID: nf-8f87bd6e384867feccdb4fbbd5dac197-8dabb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.8 / 1
Memory (peak / alloc): 37.3 MB / 1.0 GB
Process I/O (rchar / wchar): 51.8 MB / 27.3 MB
Disk I/O (read / write): - / 27.3 MB
Host: i-09de6507ea61f22f7 ( spot)

Runtime

Submitted: Jan 27, 2026 3:18:09 PM
Completed: Jan 27, 2026 3:18:19 PM
Total Duration: 9s

Phases

Queue: 4s
Execution: 3s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: c0/e068bf
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/e068bffa40ccaa389573d98949ec94
Native ID: nf-c0e068bffa40ccaa389573d98949ec94-0761a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.8 / 1
Memory (peak / alloc): 11.0 MB / 2.0 GB
Process I/O (rchar / wchar): 8.9 MB / 4.7 MB
Disk I/O (read / write): - / 4.7 MB
Host: i-0b325e9d694a32573 ( spot)

Runtime

Submitted: Jan 27, 2026 3:02:59 AM
Completed: Jan 27, 2026 3:03:08 AM
Total Duration: 8s

Phases

Queue: 5s
Execution: 1s
Stage/Unstage: 2s