NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
SNPEFF_SNPEFF (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: 7a9d9dbb7fcc
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 1b/e4ede1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/e4ede11fa7d74584f19b7c13d696d4
Native ID: nf-1be4ede11fa7d74584f19b7c13d696d4-df8f1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.2 / 2
Memory (peak / alloc): 2.8 GB / 8.0 GB
Process I/O (rchar / wchar): 482.0 MB / 4.3 MB
Disk I/O (read / write): - / 1.4 MB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:33:05 PM
Completed: Jan 27, 2026 4:34:08 PM
Total Duration: 1m 2s

Phases

Queue: 11s
Execution: 47s
Stage/Unstage: 4s

Attempt 4

Execution

Status: succeeded - cached
Hash: c5/3344ad
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/3344ad60d656745c725ab4719bd9b1
Native ID: nf-c53344ad60d656745c725ab4719bd9b1-f82a1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 8.8 / 2
Memory (peak / alloc): 3.9 GB / 8.0 GB
Process I/O (rchar / wchar): 670.2 MB / 295.5 MB
Disk I/O (read / write): - / 292.7 MB
Host: i-0766e96e580fccfd8 ( spot)

Runtime

Submitted: Jan 27, 2026 5:05:33 PM
Completed: Jan 27, 2026 5:08:53 PM
Total Duration: 3m 19s

Phases

Queue: 12s
Execution: 3m 2s
Stage/Unstage: 5s

Attempt 3

Execution

Status: succeeded
Hash: a4/9780f0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/9780f0d1f5b9a91fd0e93f97ec54ab
Native ID: nf-a49780f0d1f5b9a91fd0e93f97ec54ab-a2aaf

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.0 / 2
Memory (peak / alloc): 2.7 GB / 8.0 GB
Process I/O (rchar / wchar): 594.4 MB / 3.3 MB
Disk I/O (read / write): - / 420.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:39 PM
Completed: Jan 27, 2026 4:38:50 PM
Total Duration: 1m 10s

Phases

Queue: 12s
Execution: 55s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: ea/004b23
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/004b235711c223e46ea4875d2d5fe0
Native ID: nf-ea004b235711c223e46ea4875d2d5fe0-ff7aa

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.7 / 2
Memory (peak / alloc): 3.2 GB / 8.0 GB
Process I/O (rchar / wchar): 669.9 MB / 286.6 MB
Disk I/O (read / write): - / 283.8 MB
Host: i-0866f49d6fccf8031 ( spot)

Runtime

Submitted: Jan 27, 2026 1:01:05 PM
Completed: Jan 27, 2026 1:04:37 PM
Total Duration: 3m 31s

Phases

Queue: 11s
Execution: 3m 15s
Stage/Unstage: 5s

Attempt 1

Execution

Status: succeeded
Hash: cc/55d147
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/55d147fc6869ddf19900c9249200c8
Native ID: nf-cc55d147fc6869ddf19900c9249200c8-14803

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.2 / 2
Memory (peak / alloc): 2.9 GB / 8.0 GB
Process I/O (rchar / wchar): 640.6 MB / 18.8 MB
Disk I/O (read / write): - / 15.9 MB
Host: i-0f04517ea0b903be7 ( spot)

Runtime

Submitted: Jan 26, 2026 10:39:36 PM
Completed: Jan 26, 2026 10:40:52 PM
Total Duration: 1m 15s

Phases

Queue: 10s
Execution: 1m 2s
Stage/Unstage: 3s