NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;SNP_GRCh38_hg38_wChr) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_MPILEUP (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: 7ff086a24084
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: e7/aef22d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/aef22d20251b9927fe93c09f50c8b1
Native ID: nf-e7aef22d20251b9927fe93c09f50c8b1-6919b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 2
Memory (peak / alloc): 586.7 MB / 2.0 GB
Process I/O (rchar / wchar): 28.0 GB / 12.0 MB
Disk I/O (read / write): 28.0 GB / 1.1 MB
Host: i-0779fb77a87cd1ee1 ( spot)

Runtime

Submitted: Jan 27, 2026 12:32:27 PM
Completed: Jan 27, 2026 12:36:10 PM
Total Duration: 3m 42s

Phases

Queue: 6s
Execution: 2m 41s
Stage/Unstage: 55s

Attempt 1

Execution

Status: succeeded
Hash: 8b/41ee7c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/41ee7c54c0a70bcd64a914d37da308
Native ID: nf-8b41ee7c54c0a70bcd64a914d37da308-c744f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 577.4 MB / 2.0 GB
Process I/O (rchar / wchar): 21.0 GB / 11.8 MB
Disk I/O (read / write): 21.0 GB / 1.0 MB
Host: i-00ad7cfb3c88d0b04 ( spot)

Runtime

Submitted: Jan 26, 2026 9:38:29 PM
Completed: Jan 26, 2026 9:41:14 PM
Total Duration: 2m 44s

Phases

Queue: 4s
Execution: 2m 2s
Stage/Unstage: 38s