NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_QUAL (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
VCFTOOLS_TSTV_QUAL (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller)

Login

Task Info

Status: succeeded
Hash: 80a6bc76d0cd
Process: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_QUAL
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 51/12fdfc
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/51/12fdfc0ed80c2a0d4aa98871c5b55b
Native ID: nf-5112fdfc0ed80c2a0d4aa98871c5b55b-6101a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 16.2 MB / 1.0 GB
Process I/O (rchar / wchar): 28.3 MB / 1.5 MB
Disk I/O (read / write): - / 1.5 MB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 5:04:34 PM
Completed: Jan 27, 2026 5:04:42 PM
Total Duration: 7s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 3s

Attempt 4

Execution

Status: succeeded - cached
Hash: 3b/716b97
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/716b971251b4bfe60eeee1a3088139
Native ID: nf-3b716b971251b4bfe60eeee1a3088139-daec3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.6 MB / 1.0 GB
Process I/O (rchar / wchar): 40.5 MB / 2.4 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 6:58:03 PM
Completed: Jan 27, 2026 6:58:11 PM
Total Duration: 7s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: c5/7cb1a3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/7cb1a30c36a5324364e48859a2801b
Native ID: nf-c57cb1a30c36a5324364e48859a2801b-5b579

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 15.6 MB / 1.0 GB
Process I/O (rchar / wchar): 24.5 MB / 1.0 MB
Disk I/O (read / write): - / 1.0 MB
Host: i-0f175a980ffbd2986 ( spot)

Runtime

Submitted: Jan 27, 2026 4:46:06 PM
Completed: Jan 27, 2026 4:46:15 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: db/c812d6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/c812d62f111229c6246d48d4387445
Native ID: nf-dbc812d62f111229c6246d48d4387445-aa6e0

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 1
Memory (peak / alloc): 9.7 MB / 1.0 GB
Process I/O (rchar / wchar): 69.6 KB / 1.7 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 3:08:45 PM
Completed: Jan 27, 2026 3:08:52 PM
Total Duration: 6s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 02/0f16aa
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/0f16aa4ed7ac3650c998fc044fde19
Native ID: nf-020f16aa4ed7ac3650c998fc044fde19-7497d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.9 / 1
Memory (peak / alloc): 9.9 MB / 2.0 GB
Process I/O (rchar / wchar): 471.4 KB / 1.7 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-09db62cc8a936d853 ( spot)

Runtime

Submitted: Jan 27, 2026 2:52:58 AM
Completed: Jan 27, 2026 2:53:05 AM
Total Duration: 6s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -