NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: 819942ee2540
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 2e/c45184
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/c45184afba713ebe5a65f27deb22c7
Native ID: nf-2ec45184afba713ebe5a65f27deb22c7-95715

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 8.7 / 1
Memory (peak / alloc): 37.7 MB / 1.0 GB
Process I/O (rchar / wchar): 69.5 MB / 35.7 MB
Disk I/O (read / write): - / 35.7 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 28, 2026 2:45:30 AM
Completed: Jan 28, 2026 2:45:40 AM
Total Duration: 9s

Phases

Queue: 3s
Execution: 4s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 8a/99aec7
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/99aec7e7adcc6437aec084323ba77d
Native ID: nf-8a99aec7e7adcc6437aec084323ba77d-acde1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.8 / 1
Memory (peak / alloc): 42.7 MB / 1.0 GB
Process I/O (rchar / wchar): 151.8 MB / 77.7 MB
Disk I/O (read / write): - / 77.8 MB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:50:05 PM
Completed: Jan 27, 2026 4:50:23 PM
Total Duration: 17s

Phases

Queue: 2s
Execution: 11s
Stage/Unstage: 4s

Attempt 2

Execution

Status: succeeded
Hash: 66/a9f82e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/a9f82ec905d406c9f80d390e0ad981
Native ID: nf-66a9f82ec905d406c9f80d390e0ad981-8a013

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 74.4 / 1
Memory (peak / alloc): 16.9 MB / 1.0 GB
Process I/O (rchar / wchar): 2.0 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-0716a809e2758bbe1 ( spot)

Runtime

Submitted: Jan 27, 2026 3:22:29 PM
Completed: Jan 27, 2026 3:22:36 PM
Total Duration: 6s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 49/60a588
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/60a588d021d42015411414363d8d06
Native ID: nf-4960a588d021d42015411414363d8d06-fceba

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 12.4 / 1
Memory (peak / alloc): 3.3 MB / 2.0 GB
Process I/O (rchar / wchar): 239.9 KB / 39.5 KB
Disk I/O (read / write): - / 52.0 KB
Host: i-011f5915fac149252 ( spot)

Runtime

Submitted: Jan 27, 2026 3:06:10 AM
Completed: Jan 27, 2026 3:06:18 AM
Total Duration: 7s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -