NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
TABIX_TABIX (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq)

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Task Info

Status: succeeded
Hash: 8594d3efa59e
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: fd/dcbcad
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fd/dcbcad0b19062a3cde738946b4665a
Native ID: nf-fddcbcad0b19062a3cde738946b4665a-2f855

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 1
Memory (peak / alloc): 20.9 MB / 1.0 GB
Process I/O (rchar / wchar): 468.9 MB / 1.8 MB
Disk I/O (read / write): - / 1.8 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 28, 2026 12:06:40 AM
Completed: Jan 28, 2026 12:06:51 AM
Total Duration: 10s

Phases

Queue: 2s
Execution: 4s
Stage/Unstage: 4s

Attempt 4

Execution

Status: succeeded - cached
Hash: e4/dec292
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/dec292910159f2eb775842ba1953e1
Native ID: nf-e4dec292910159f2eb775842ba1953e1-51539

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.5 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 124.8 KB / 6.7 KB
Disk I/O (read / write): - / 8.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:39:10 PM
Completed: Jan 27, 2026 4:39:16 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: 16/1f7c38
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/1f7c382d74b4ad7016a1017c32165c
Native ID: nf-161f7c382d74b4ad7016a1017c32165c-14179

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.9 / 1
Memory (peak / alloc): 3.2 MB / 1.0 GB
Process I/O (rchar / wchar): 225.0 KB / 6.5 KB
Disk I/O (read / write): - / 8.0 KB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:35:03 PM
Completed: Jan 27, 2026 4:35:08 PM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: cd/1b6cec
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/1b6cec68c71250f1a13d143dc4fb4b
Native ID: nf-cd1b6cec68c71250f1a13d143dc4fb4b-da296

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.9 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 225.0 KB / 6.4 KB
Disk I/O (read / write): - / 8.0 KB
Host: i-0d47f251c10fdebed ( spot)

Runtime

Submitted: Jan 27, 2026 12:42:25 PM
Completed: Jan 27, 2026 12:42:31 PM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 2d/7d82bd
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/7d82bd07935540746abfa451b53e63
Native ID: nf-2d7d82bd07935540746abfa451b53e63-9be5c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 1
Memory (peak / alloc): 7.7 MB / 2.0 GB
Process I/O (rchar / wchar): 7.7 MB / 154.9 KB
Disk I/O (read / write): - / 156.0 KB
Host: i-0d37f05ae3de287b3 ( spot)

Runtime

Submitted: Jan 26, 2026 9:50:47 PM
Completed: Jan 26, 2026 9:50:51 PM
Total Duration: 3s

Phases

Queue: 2s
Execution: -
Stage/Unstage: -