NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller)

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Task Info

Status: succeeded
Hash: 8985c5dfbf6f
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller
Attempts: 3

Attempt 3

Execution

Status: succeeded
Hash: 6d/6d1ed6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6d/6d1ed617fc4ce442acba2de028f963
Native ID: nf-6d6d1ed617fc4ce442acba2de028f963-2a2a5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.0 / 1
Memory (peak / alloc): 37.9 MB / 1.0 GB
Process I/O (rchar / wchar): 59.4 MB / 31.3 MB
Disk I/O (read / write): - / 31.3 MB
Host: i-05fe37b0e98b9dec7 ( spot)

Runtime

Submitted: Jan 27, 2026 5:05:14 PM
Completed: Jan 27, 2026 5:05:25 PM
Total Duration: 10s

Phases

Queue: 4s
Execution: 4s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 53/a62b74
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/a62b7421569af4ee920af9e9f5a8e1
Native ID: nf-53a62b7421569af4ee920af9e9f5a8e1-11103

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.9 / 1
Memory (peak / alloc): 41.8 MB / 1.0 GB
Process I/O (rchar / wchar): 85.9 MB / 44.6 MB
Disk I/O (read / write): - / 44.7 MB
Host: i-09de6507ea61f22f7 ( spot)

Runtime

Submitted: Jan 27, 2026 3:22:59 PM
Completed: Jan 27, 2026 3:23:10 PM
Total Duration: 10s

Phases

Queue: 2s
Execution: 6s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: e7/a1198a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/a1198a89e8f440c1f7fc7b5d265ed4
Native ID: nf-e7a1198a89e8f440c1f7fc7b5d265ed4-4f615

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.1 / 1
Memory (peak / alloc): 11.6 MB / 2.0 GB
Process I/O (rchar / wchar): 222.5 KB / 28.8 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-0b2b7e57225588990 ( spot)

Runtime

Submitted: Jan 27, 2026 3:06:12 AM
Completed: Jan 27, 2026 3:06:18 AM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -