NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq)

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Task Info

Status: succeeded
Hash: 8cdf79a75f3b
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 09/bacc26
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/bacc2627aad39381dd4258dce89bbb
Native ID: nf-09bacc2627aad39381dd4258dce89bbb-63596

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.3 / 1
Memory (peak / alloc): 392.2 MB / 1.0 GB
Process I/O (rchar / wchar): 477.1 MB / 216.1 MB
Disk I/O (read / write): - / 216.3 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 27, 2026 11:10:41 PM
Completed: Jan 27, 2026 11:11:16 PM
Total Duration: 34s

Phases

Queue: 4s
Execution: 26s
Stage/Unstage: 4s

Attempt 4

Execution

Status: succeeded - cached
Hash: 77/c98937
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/c989379d385f1fcde6e2ccaa16bd21
Native ID: nf-77c989379d385f1fcde6e2ccaa16bd21-d7525

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.4 / 1
Memory (peak / alloc): 300.9 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 34.4 KB
Disk I/O (read / write): - / 44.0 KB
Host: i-0871dc4d898f98e3a ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:01 PM
Completed: Jan 27, 2026 4:37:08 PM
Total Duration: 6s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 3d/51928e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/51928e5593fdaf2e50455132bcefb1
Native ID: nf-3d51928e5593fdaf2e50455132bcefb1-ca5fb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.9 / 1
Memory (peak / alloc): 307.7 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 26.9 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:32:26 PM
Completed: Jan 27, 2026 4:32:35 PM
Total Duration: 8s

Phases

Queue: 5s
Execution: 1s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 9f/3966cb
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/3966cba40c5e3bb3cc51c1828736c4
Native ID: nf-9f3966cba40c5e3bb3cc51c1828736c4-d3993

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.8 / 1
Memory (peak / alloc): 313.0 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 26.5 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-0ec6b708d35528bbd ( spot)

Runtime

Submitted: Jan 27, 2026 12:39:56 PM
Completed: Jan 27, 2026 12:40:06 PM
Total Duration: 9s

Phases

Queue: 5s
Execution: 2s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 66/0a3453
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/0a34530ef6b338dac628d7463a4730
Native ID: nf-660a34530ef6b338dac628d7463a4730-a362c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.5 / 1
Memory (peak / alloc): 314.5 MB / 2.0 GB
Process I/O (rchar / wchar): 40.6 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-0a040fd4fbf3872f0 ( spot)

Runtime

Submitted: Jan 26, 2026 9:47:17 PM
Completed: Jan 26, 2026 9:47:26 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s