NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
SNPEFF_SNPEFF (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: 91bca8ef4150
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: a4/9780f0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/9780f0d1f5b9a91fd0e93f97ec54ab
Native ID: nf-a49780f0d1f5b9a91fd0e93f97ec54ab-a2aaf

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.0 / 2
Memory (peak / alloc): 2.7 GB / 8.0 GB
Process I/O (rchar / wchar): 594.4 MB / 3.3 MB
Disk I/O (read / write): - / 420.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:39 PM
Completed: Jan 27, 2026 4:38:50 PM
Total Duration: 1m 10s

Phases

Queue: 12s
Execution: 55s
Stage/Unstage: 3s

Attempt 4

Execution

Status: succeeded - cached
Hash: 1b/e4ede1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/e4ede11fa7d74584f19b7c13d696d4
Native ID: nf-1be4ede11fa7d74584f19b7c13d696d4-df8f1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.2 / 2
Memory (peak / alloc): 2.8 GB / 8.0 GB
Process I/O (rchar / wchar): 482.0 MB / 4.3 MB
Disk I/O (read / write): - / 1.4 MB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:33:05 PM
Completed: Jan 27, 2026 4:34:08 PM
Total Duration: 1m 2s

Phases

Queue: 11s
Execution: 47s
Stage/Unstage: 4s

Attempt 3

Execution

Status: succeeded
Hash: da/7721f6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/7721f623aae3b4e680b181fce2fa71
Native ID: nf-da7721f623aae3b4e680b181fce2fa71-83a72

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.0 / 2
Memory (peak / alloc): 2.5 GB / 8.0 GB
Process I/O (rchar / wchar): 164.8 MB / 3.2 MB
Disk I/O (read / write): - / 316.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:39 PM
Completed: Jan 27, 2026 4:38:20 PM
Total Duration: 40s

Phases

Queue: 12s
Execution: 25s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 84/2f0b3b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/2f0b3b353f893966eb946c7252e751
Native ID: nf-842f0b3b353f893966eb946c7252e751-c7b7c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.2 / 2
Memory (peak / alloc): 2.8 GB / 8.0 GB
Process I/O (rchar / wchar): 619.7 MB / 10.3 MB
Disk I/O (read / write): - / 7.4 MB
Host: i-08d30457a93efd5a9 ( spot)

Runtime

Submitted: Jan 27, 2026 12:50:35 PM
Completed: Jan 27, 2026 12:51:48 PM
Total Duration: 1m 12s

Phases

Queue: 10s
Execution: 59s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: b9/f52371
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/f52371ed50b2fac20358b88da879c4
Native ID: nf-b9f52371ed50b2fac20358b88da879c4-4afa9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 2
Memory (peak / alloc): 2.7 GB / 8.0 GB
Process I/O (rchar / wchar): 639.1 MB / 5.7 MB
Disk I/O (read / write): - / 2.8 MB
Host: i-007ce1a49e39348c4 ( spot)

Runtime

Submitted: Jan 26, 2026 9:51:37 PM
Completed: Jan 26, 2026 9:52:43 PM
Total Duration: 1m 5s

Phases

Queue: 2s
Execution: 1m 0s
Stage/Unstage: 3s