NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
TABIX_TABIX (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: 92b85eae7488
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: c8/8a9e34
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/8a9e348bbfe4a1d8bf255ff2aac787
Native ID: nf-c88a9e348bbfe4a1d8bf255ff2aac787-7a16e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.8 / 1
Memory (peak / alloc): 6.5 MB / 1.0 GB
Process I/O (rchar / wchar): 63.3 MB / 753.3 KB
Disk I/O (read / write): - / 756.0 KB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 28, 2026 2:53:40 AM
Completed: Jan 28, 2026 2:53:47 AM
Total Duration: 6s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: 4b/c8fa69
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/c8fa695a50769143c5316566b96692
Native ID: nf-4bc8fa695a50769143c5316566b96692-86472

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.7 / 1
Memory (peak / alloc): 14.2 MB / 1.0 GB
Process I/O (rchar / wchar): 160.0 MB / 1.4 MB
Disk I/O (read / write): - / 1.4 MB
Host: i-0071bb6d73055e07a ( spot)

Runtime

Submitted: Jan 27, 2026 5:13:43 PM
Completed: Jan 27, 2026 5:13:55 PM
Total Duration: 11s

Phases

Queue: 6s
Execution: 2s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 9d/36069f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/36069f83310ae2ced0552a0e1e96d1
Native ID: nf-9d36069f83310ae2ced0552a0e1e96d1-1918f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.8 / 1
Memory (peak / alloc): 6.7 MB / 1.0 GB
Process I/O (rchar / wchar): 90.0 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-08b3ec3207aa3f391 ( spot)

Runtime

Submitted: Jan 27, 2026 3:29:48 PM
Completed: Jan 27, 2026 3:29:56 PM
Total Duration: 7s

Phases

Queue: 4s
Execution: 1s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 06/7d0162
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/7d016247a5b60075c74c1b3e33101a
Native ID: nf-067d016247a5b60075c74c1b3e33101a-56da5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 3.3 MB / 2.0 GB
Process I/O (rchar / wchar): 131.6 KB / 6.5 KB
Disk I/O (read / write): - / 8.0 KB
Host: i-0cd70b38ac4d76a04 ( spot)

Runtime

Submitted: Jan 27, 2026 3:08:00 AM
Completed: Jan 27, 2026 3:08:06 AM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -