NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: 9b2c0a1169b3
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 77/c98937
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/c989379d385f1fcde6e2ccaa16bd21
Native ID: nf-77c989379d385f1fcde6e2ccaa16bd21-d7525

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.4 / 1
Memory (peak / alloc): 300.9 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 34.4 KB
Disk I/O (read / write): - / 44.0 KB
Host: i-0871dc4d898f98e3a ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:01 PM
Completed: Jan 27, 2026 4:37:08 PM
Total Duration: 6s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 2s

Attempt 4

Execution

Status: succeeded - cached
Hash: 48/5047a2
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/5047a248a4cccd6e4197a7846d8d1d
Native ID: nf-485047a248a4cccd6e4197a7846d8d1d-2526c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 9.4 / 1
Memory (peak / alloc): 299.7 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 25.6 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-03e17eb1330b9acd1 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:01 PM
Completed: Jan 27, 2026 4:37:09 PM
Total Duration: 7s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 1s

Attempt 3

Execution

Status: succeeded
Hash: af/c82105
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/c82105dc20cf14a16b4b04f61806ca
Native ID: nf-afc82105dc20cf14a16b4b04f61806ca-69b6c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.2 / 1
Memory (peak / alloc): 391.3 MB / 1.0 GB
Process I/O (rchar / wchar): 89.6 MB / 28.6 MB
Disk I/O (read / write): - / 28.7 MB
Host: i-0f1dc3d204aa7b2b2 ( spot)

Runtime

Submitted: Jan 27, 2026 4:34:44 PM
Completed: Jan 27, 2026 4:34:55 PM
Total Duration: 10s

Phases

Queue: 3s
Execution: 5s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 41/815f6b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/41/815f6ba1f17251996b2d14d93cc2f2
Native ID: nf-41815f6ba1f17251996b2d14d93cc2f2-6276a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.1 / 1
Memory (peak / alloc): 390.5 MB / 1.0 GB
Process I/O (rchar / wchar): 92.4 MB / 30.0 MB
Disk I/O (read / write): - / 30.0 MB
Host: i-0c214cca00f4652c8 ( spot)

Runtime

Submitted: Jan 27, 2026 12:41:56 PM
Completed: Jan 27, 2026 12:42:07 PM
Total Duration: 10s

Phases

Queue: 2s
Execution: 5s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: 44/db0807
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/db0807abaf98e8f24d470cd082cf84
Native ID: nf-44db0807abaf98e8f24d470cd082cf84-e6af7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.2 / 1
Memory (peak / alloc): 316.0 MB / 2.0 GB
Process I/O (rchar / wchar): 38.8 MB / 34.9 KB
Disk I/O (read / write): - / 48.0 KB
Host: i-0d37f05ae3de287b3 ( spot)

Runtime

Submitted: Jan 26, 2026 9:48:57 PM
Completed: Jan 26, 2026 9:49:06 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s