NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
SNPEFF_SNPEFF (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper)

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Task Info

Status: succeeded
Hash: 9c1d0635ef96
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 59/3f0cd9
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/3f0cd96ea0b66e0c8bff3ae855ef56
Native ID: nf-593f0cd96ea0b66e0c8bff3ae855ef56-80de0

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.7 / 2
Memory (peak / alloc): 5.4 GB / 8.0 GB
Process I/O (rchar / wchar): 666.1 MB / 257.6 MB
Disk I/O (read / write): - / 254.8 MB
Host: i-060fd6816157acc2f ( spot)

Runtime

Submitted: Jan 27, 2026 4:47:05 PM
Completed: Jan 27, 2026 4:50:23 PM
Total Duration: 3m 17s

Phases

Queue: 12s
Execution: 3m 2s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: 5e/fa827c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/fa827cc63520d8d0b3502851c0fd82
Native ID: nf-5efa827cc63520d8d0b3502851c0fd82-a8d2f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.4 / 2
Memory (peak / alloc): 3.2 GB / 8.0 GB
Process I/O (rchar / wchar): 619.7 MB / 10.5 MB
Disk I/O (read / write): - / 7.6 MB
Host: i-015ca7ef1c334fac7 ( spot)

Runtime

Submitted: Jan 27, 2026 4:44:45 PM
Completed: Jan 27, 2026 4:46:02 PM
Total Duration: 1m 16s

Phases

Queue: 10s
Execution: 1m 3s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 6a/92bb36
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/92bb36330b723443419cdd76ab889e
Native ID: nf-6a92bb36330b723443419cdd76ab889e-ef74c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 2
Memory (peak / alloc): 3.2 GB / 8.0 GB
Process I/O (rchar / wchar): 594.3 MB / 3.3 MB
Disk I/O (read / write): 63.0 MB / 400.0 KB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 3:09:36 PM
Completed: Jan 27, 2026 3:10:55 PM
Total Duration: 1m 18s

Phases

Queue: 16s
Execution: 59s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: 38/248654
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/248654311eef24d73f59229194f0fa
Native ID: nf-38248654311eef24d73f59229194f0fa-1d910

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 2
Memory (peak / alloc): 2.6 GB / 8.0 GB
Process I/O (rchar / wchar): 640.5 MB / 19.3 MB
Disk I/O (read / write): - / 16.4 MB
Host: i-096ef805b2e2b00ee ( spot)

Runtime

Submitted: Jan 27, 2026 2:28:48 AM
Completed: Jan 27, 2026 2:30:03 AM
Total Duration: 1m 14s

Phases

Queue: 9s
Execution: 1m 2s
Stage/Unstage: 3s