succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_144475607-156030895) 23s 21s - - 3.2 MB 51% 108.6 KB 3.4 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_37285838-49348394) 10s 8s - - 3.1 MB 119% 108.1 KB 3.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_49528395-50228964) 10s 8s - - 3.3 MB 81% 108.2 KB 3.4 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_58605580-62412542) 22s 20s - - 3.2 MB 61% 108.7 KB 3.4 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrY_20257794-21739542) 13s 11s - - 3.2 MB 162% 108.6 KB 3.4 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrY_2781480-9046914) 9s 7s - - 3.2 MB 63% 108.2 KB 3.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrY_56673215-56771509) 9s 8s - - 3.3 MB 86% 108.2 KB 3.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrY_9453714-10266944) 12s 10s - - 3.3 MB 109% 109.4 KB 3.6 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:PREPARE_REFERENCE_CNVKIT:CNVKIT_ANTITARGET (intervals) 1m 33s 1m 25s 6s 2s 170.1 MB 519% 112.6 MB 107.1 KB 0 bytes 116.0 KB 2
succeeded NFCORE_SAREK:PREPARE_REFERENCE_CNVKIT:CNVKIT_REFERENCE (Homo_sapiens_assembly38.fasta) 1m 21s 2s 1m 7s 12s 462.3 MB 137% 6.0 GB 449.6 KB 0 bytes 468.0 KB 2
succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 9s 8s 0s 0s 0 bytes 94% 106.7 KB 1.5 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation) 16s 13s 0s 2s 16.6 MB 96% 2.7 MB 6.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:INDEX_CRAM (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) 2m 47s 3s 1m 50s 54s 35.6 MB 129% 22.1 GB 4.5 MB 13.1 GB 4.5 MB 2
succeeded NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:INDEX_CRAM (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33) 16m 34s 33s 10m 53s 5m 8s 64.3 MB 148% 109.6 GB 5.7 MB 109.6 GB 5.7 MB 2
succeeded NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) 23m 11s 24s 20m 57s 1m 50s 320.4 MB 123% 24.5 GB 22.1 GB 23.4 GB 22.1 GB 2
succeeded NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33) 45m 34s 3s 38m 11s 7m 20s 370.5 MB 360% 132.8 GB 109.6 GB 132.9 GB 109.7 GB 3
succeeded NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;chr10_124121503-133690466) 2m 14s 3s 19s 1m 52s 760.7 MB 238% 126.4 MB 63.7 MB 5.3 MB 63.7 MB 2
succeeded NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;chr10_38573339-38906036) 1m 52s 2s 21s 1m 29s 576.3 MB 210% 135.9 MB 80.0 MB 4.0 KB 80.1 MB 2
succeeded NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;chr10_47870369-124121200) 3m 39s 3s 2m 3s 1m 33s 695.3 MB 168% 393.8 MB 634.2 MB 5.0 MB 634.6 MB 2
succeeded NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;chr1_10001-207666) 2m 11s 4s 47s 1m 20s 484.8 MB 179% 187.8 MB 200.5 MB 82.8 MB 200.5 MB 1
1206 items found |
1 2 3 4 5 6 7 ... 60 61