NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
VCFTOOLS_TSTV_COUNT (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

Login

Task Info

Status: succeeded
Hash: a24a6d09f000
Process: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 84/88f8ab
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/88f8abfc3622ce1529e4efc8c79d2e
Native ID: nf-8488f8abfc3622ce1529e4efc8c79d2e-792d2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.4 / 1
Memory (peak / alloc): 10.3 MB / 1.0 GB
Process I/O (rchar / wchar): 78.2 KB / 2.4 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0766e96e580fccfd8 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:00 PM
Completed: Jan 27, 2026 4:37:06 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 4

Execution

Status: succeeded - cached
Hash: e1/ce993d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/ce993d1ffa3d1ca165eec36998c645
Native ID: nf-e1ce993d1ffa3d1ca165eec36998c645-d6333

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.9 / 1
Memory (peak / alloc): 9.9 MB / 1.0 GB
Process I/O (rchar / wchar): 71.5 KB / 1.7 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-03e17eb1330b9acd1 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:00 PM
Completed: Jan 27, 2026 4:37:06 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: 0e/225518
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/225518b6fae09829eb8117c65b93ed
Native ID: nf-0e225518b6fae09829eb8117c65b93ed-85d6a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.5 MB / 1.0 GB
Process I/O (rchar / wchar): 24.9 MB / 3.9 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0e2783751d1868218 ( spot)

Runtime

Submitted: Jan 27, 2026 4:34:44 PM
Completed: Jan 27, 2026 4:34:54 PM
Total Duration: 9s

Phases

Queue: 2s
Execution: 4s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: 26/c832e0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/c832e0fea43ada7be8197b1f3c67ec
Native ID: nf-26c832e0fea43ada7be8197b1f3c67ec-df8f5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.3 MB / 1.0 GB
Process I/O (rchar / wchar): 26.3 MB / 3.9 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0a0d7aaa97afcf611 ( spot)

Runtime

Submitted: Jan 27, 2026 12:41:56 PM
Completed: Jan 27, 2026 12:42:06 PM
Total Duration: 9s

Phases

Queue: 2s
Execution: 4s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: 85/461e41
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/461e4122cae9ac2d342f2735992c9b
Native ID: nf-85461e4122cae9ac2d342f2735992c9b-58e73

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 13.1 MB / 2.0 GB
Process I/O (rchar / wchar): 76.9 KB / 2.3 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-040efb27cd5693285 ( spot)

Runtime

Submitted: Jan 26, 2026 9:48:57 PM
Completed: Jan 26, 2026 9:49:04 PM
Total Duration: 6s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -