NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller)

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Task Info

Status: succeeded
Hash: b03a4eaa5530
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller
Attempts: 3

Attempt 3

Execution

Status: succeeded
Hash: 08/797a8e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/797a8ec8549afd53f722fa56ac5e0c
Native ID: nf-08797a8ec8549afd53f722fa56ac5e0c-b7b6f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.6 / 1
Memory (peak / alloc): 392.0 MB / 1.0 GB
Process I/O (rchar / wchar): 96.3 MB / 31.2 MB
Disk I/O (read / write): - / 31.3 MB
Host: i-0f2b30a53f7fd60b5 ( spot)

Runtime

Submitted: Jan 27, 2026 5:04:34 PM
Completed: Jan 27, 2026 5:04:47 PM
Total Duration: 12s

Phases

Queue: 5s
Execution: 5s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 13/9bab0e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/9bab0e7ee63bc1d5037dee7d400b3d
Native ID: nf-139bab0e7ee63bc1d5037dee7d400b3d-a4fcc

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.7 / 1
Memory (peak / alloc): 391.4 MB / 1.0 GB
Process I/O (rchar / wchar): 151.1 MB / 44.6 MB
Disk I/O (read / write): - / 45.0 MB
Host: i-0675a2f490e8f1b97 ( spot)

Runtime

Submitted: Jan 27, 2026 3:22:18 PM
Completed: Jan 27, 2026 3:22:33 PM
Total Duration: 14s

Phases

Queue: 4s
Execution: 7s
Stage/Unstage: 3s

Attempt 1

Execution

Status: succeeded
Hash: ba/dd3f94
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/dd3f94ed8b0f2efc07218251798d96
Native ID: nf-badd3f94ed8b0f2efc07218251798d96-61919

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.1 / 1
Memory (peak / alloc): 292.8 MB / 2.0 GB
Process I/O (rchar / wchar): 38.8 MB / 28.6 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-06b752a1bbf4e848a ( spot)

Runtime

Submitted: Jan 27, 2026 3:05:34 AM
Completed: Jan 27, 2026 3:05:44 AM
Total Duration: 9s

Phases

Queue: 6s
Execution: 1s
Stage/Unstage: 2s