NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
ENSEMBLVEP_VEP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq)

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Task Info

Status: succeeded
Hash: c87a83991012
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;tnseq
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 1c/3574b4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/3574b423e82feb9c9102b959c3ff8c
Native ID: nf-1c3574b423e82feb9c9102b959c3ff8c-c99d5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.3 / 4
Memory (peak / alloc): 953.6 MB / 8.0 GB
Process I/O (rchar / wchar): 321.9 GB / 10.2 GB
Disk I/O (read / write): 20.3 GB / 470.4 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 27, 2026 11:23:00 PM
Completed: Jan 28, 2026 12:06:35 AM
Total Duration: 43m 34s

Phases

Queue: 16s
Execution: 43m 5s
Stage/Unstage: 13s

Attempt 4

Execution

Status: succeeded - cached
Hash: c5/a71ea6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/a71ea6e054a266846150f338238a25
Native ID: nf-c5a71ea6e054a266846150f338238a25-e7289

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 189.9 MB / 8.0 GB
Process I/O (rchar / wchar): 58.5 MB / 581.7 KB
Disk I/O (read / write): 23.2 MB / 48.0 KB
Host: i-098ca2046405ddec0 ( spot)

Runtime

Submitted: Jan 27, 2026 4:38:39 PM
Completed: Jan 27, 2026 4:39:06 PM
Total Duration: 26s

Phases

Queue: 14s
Execution: 2s
Stage/Unstage: 10s

Attempt 3

Execution

Status: succeeded
Hash: 48/64041a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/64041aff948a8df738a4df46c7862f
Native ID: nf-4864041aff948a8df738a4df46c7862f-b86d5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 201.6 MB / 8.0 GB
Process I/O (rchar / wchar): 79.3 MB / 2.6 MB
Disk I/O (read / write): 69.6 MB / 152.0 KB
Host: i-0f175a980ffbd2986 ( spot)

Runtime

Submitted: Jan 27, 2026 4:34:24 PM
Completed: Jan 27, 2026 4:35:00 PM
Total Duration: 35s

Phases

Queue: 20s
Execution: 3s
Stage/Unstage: 12s

Attempt 2

Execution

Status: succeeded
Hash: 98/e9aa25
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/e9aa254c88aa5f6c6aa119e7825f32
Native ID: nf-98e9aa254c88aa5f6c6aa119e7825f32-cb8ad

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 94.7 MB / 8.0 GB
Process I/O (rchar / wchar): 73.1 MB / 2.6 MB
Disk I/O (read / write): 62.2 MB / 152.0 KB
Host: i-01552a0a80cf62ec1 ( spot)

Runtime

Submitted: Jan 27, 2026 12:41:46 PM
Completed: Jan 27, 2026 12:42:21 PM
Total Duration: 34s

Phases

Queue: 18s
Execution: 3s
Stage/Unstage: 13s

Attempt 1

Execution

Status: succeeded
Hash: 7e/2ad7b0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/2ad7b05a090db591d14e4b8943af62
Native ID: nf-7e2ad7b05a090db591d14e4b8943af62-8e620

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.0 / 4
Memory (peak / alloc): 2.1 GB / 8.0 GB
Process I/O (rchar / wchar): 5.0 GB / 100.5 MB
Disk I/O (read / write): 6.2 GB / 7.6 MB
Host: i-0a3db75041a6b49c1 ( spot)

Runtime

Submitted: Jan 26, 2026 9:49:17 PM
Completed: Jan 26, 2026 9:50:39 PM
Total Duration: 1m 21s

Phases

Queue: 16s
Execution: 51s
Stage/Unstage: 14s