NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
VCFTOOLS_TSTV_COUNT (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

Login

Task Info

Status: succeeded
Hash: d6c8b9c18424
Process: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: 58/4dbf58
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/4dbf586c07bff1396992ada90cd09a
Native ID: nf-584dbf586c07bff1396992ada90cd09a-dddac

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.5 MB / 1.0 GB
Process I/O (rchar / wchar): 34.1 MB / 2.3 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 28, 2026 2:44:51 AM
Completed: Jan 28, 2026 2:44:59 AM
Total Duration: 7s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: c0/280516
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/280516f714b196489ae84360538243
Native ID: nf-c0280516f714b196489ae84360538243-eb137

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.4 MB / 1.0 GB
Process I/O (rchar / wchar): 99.1 MB / 2.6 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0766e96e580fccfd8 ( spot)

Runtime

Submitted: Jan 27, 2026 4:49:04 PM
Completed: Jan 27, 2026 4:49:20 PM
Total Duration: 15s

Phases

Queue: 3s
Execution: 9s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: f7/388314
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/388314ccb6e33d4b23c8f122f7cf1f
Native ID: nf-f7388314ccb6e33d4b23c8f122f7cf1f-5dc9a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 11.1 MB / 1.0 GB
Process I/O (rchar / wchar): 1.1 MB / 2.5 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0716a809e2758bbe1 ( spot)

Runtime

Submitted: Jan 27, 2026 3:22:08 PM
Completed: Jan 27, 2026 3:22:15 PM
Total Duration: 6s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: da/7c5cfa
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/7c5cfa70cc6b141a47af26cf7764bf
Native ID: nf-da7c5cfa70cc6b141a47af26cf7764bf-6aff0

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.3 / 1
Memory (peak / alloc): 9.4 MB / 2.0 GB
Process I/O (rchar / wchar): 75.9 KB / 2.4 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0fa280b28cc8d10dd ( spot)

Runtime

Submitted: Jan 27, 2026 3:05:29 AM
Completed: Jan 27, 2026 3:05:37 AM
Total Duration: 7s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -