NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta)

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Task Info

Status: succeeded
Hash: dc363940507f
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;manta
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: 35/c8e80d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/c8e80dd6a9541a8ff0a2b9b16b5b99
Native ID: nf-35c8e80dd6a9541a8ff0a2b9b16b5b99-bfe1a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 45.3 / 1
Memory (peak / alloc): 19.0 MB / 1.0 GB
Process I/O (rchar / wchar): 224.0 KB / 25.9 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 4:37:29 PM
Completed: Jan 27, 2026 4:37:36 PM
Total Duration: 6s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 3

Execution

Status: succeeded
Hash: 7b/5e6f43
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/5e6f433142d409d16030245ca43ae4
Native ID: nf-7b5e6f433142d409d16030245ca43ae4-1785e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 8.1 / 1
Memory (peak / alloc): 41.7 MB / 1.0 GB
Process I/O (rchar / wchar): 53.7 MB / 28.7 MB
Disk I/O (read / write): - / 28.7 MB
Host: i-0766e96e580fccfd8 ( spot)

Runtime

Submitted: Jan 27, 2026 4:35:23 PM
Completed: Jan 27, 2026 4:35:34 PM
Total Duration: 10s

Phases

Queue: 4s
Execution: 4s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 27/d3306f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/d3306ffd1ea3f4711fbab96a37be77
Native ID: nf-27d3306ffd1ea3f4711fbab96a37be77-093e3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 8.0 / 1
Memory (peak / alloc): 40.9 MB / 1.0 GB
Process I/O (rchar / wchar): 56.4 MB / 30.1 MB
Disk I/O (read / write): - / 30.1 MB
Host: i-0814cc4f299422e52 ( spot)

Runtime

Submitted: Jan 27, 2026 12:42:35 PM
Completed: Jan 27, 2026 12:42:46 PM
Total Duration: 10s

Phases

Queue: 4s
Execution: 4s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 9c/452603
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/452603f976ce2b7fb8c85f8e64769f
Native ID: nf-9c452603f976ce2b7fb8c85f8e64769f-10e10

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 81.1 / 1
Memory (peak / alloc): 18.3 MB / 2.0 GB
Process I/O (rchar / wchar): 240.4 KB / 35.3 KB
Disk I/O (read / write): - / 48.0 KB
Host: i-086a8e4ff08d74763 ( spot)

Runtime

Submitted: Jan 26, 2026 9:49:17 PM
Completed: Jan 26, 2026 9:49:23 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -