NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_ANNOTATE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: e388ef8986cc
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 5

Attempt 5

Execution

Status: succeeded
Hash: 22/0a2772
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/0a277232327ab6580b701000642cbb
Native ID: nf-220a277232327ab6580b701000642cbb-88e1f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 6.7 / 1
Memory (peak / alloc): 35.4 MB / 1.0 GB
Process I/O (rchar / wchar): 68.6 MB / 35.3 MB
Disk I/O (read / write): - / 35.3 MB
Host: i-0f6438535f34a7c9a ( spot)

Runtime

Submitted: Jan 28, 2026 12:54:31 PM
Completed: Jan 28, 2026 12:54:44 PM
Total Duration: 12s

Phases

Queue: 2s
Execution: 3s
Stage/Unstage: 7s

Attempt 4

Execution

Status: succeeded
Hash: 6d/8576b5
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6d/8576b5c04225b62d1a481207c79387
Native ID: nf-6d8576b5c04225b62d1a481207c79387-f1fea

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.4 / 1
Memory (peak / alloc): 41.8 MB / 1.0 GB
Process I/O (rchar / wchar): 427.7 MB / 216.2 MB
Disk I/O (read / write): - / 216.4 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 27, 2026 11:11:20 PM
Completed: Jan 27, 2026 11:11:50 PM
Total Duration: 29s

Phases

Queue: 2s
Execution: 24s
Stage/Unstage: 3s

Attempt 3

Execution

Status: succeeded
Hash: 25/7abbca
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/7abbca8356f2e0189e96accddac4ab
Native ID: nf-257abbca8356f2e0189e96accddac4ab-3d3fd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.9 / 1
Memory (peak / alloc): 3.2 MB / 1.0 GB
Process I/O (rchar / wchar): 1.9 MB / 1.1 MB
Disk I/O (read / write): - / 1.1 MB
Host: i-06f3ff33270b8e4a1 ( spot)

Runtime

Submitted: Jan 27, 2026 4:49:04 PM
Completed: Jan 27, 2026 4:49:16 PM
Total Duration: 11s

Phases

Queue: 8s
Execution: 1s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded
Hash: 6b/f05653
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/f056535785af6d5710dbb54eb30913
Native ID: nf-6bf056535785af6d5710dbb54eb30913-e29a9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 10.1 / 1
Memory (peak / alloc): 37.7 MB / 1.0 GB
Process I/O (rchar / wchar): 51.7 MB / 27.3 MB
Disk I/O (read / write): - / 27.3 MB
Host: i-0ed8dea3ccd31f222 ( spot)

Runtime

Submitted: Jan 27, 2026 3:17:50 PM
Completed: Jan 27, 2026 3:17:59 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 3s
Stage/Unstage: 1s

Attempt 1

Execution

Status: succeeded
Hash: c0/92393d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/92393ddc1733a2d18f649eece5f857
Native ID: nf-c092393ddc1733a2d18f649eece5f857-19259

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.9 / 1
Memory (peak / alloc): 12.3 MB / 2.0 GB
Process I/O (rchar / wchar): 8.9 MB / 4.7 MB
Disk I/O (read / write): - / 4.7 MB
Host: i-020804c90e063a268 ( spot)

Runtime

Submitted: Jan 27, 2026 3:02:41 AM
Completed: Jan 27, 2026 3:02:51 AM
Total Duration: 9s

Phases

Queue: 6s
Execution: 1s
Stage/Unstage: 2s