NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
ENSEMBLVEP_VEP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2)

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Task Info

Status: succeeded
Hash: ed66218d78c1
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;mutect2
Attempts: 5

Attempt 5

Execution

Status: succeeded
Hash: 30/5a7895
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/5a78952a51c460f9e383b1065eab29
Native ID: nf-305a78952a51c460f9e383b1065eab29-f379d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 4
Memory (peak / alloc): 958.4 MB / 8.0 GB
Process I/O (rchar / wchar): 35.7 GB / 1.1 GB
Disk I/O (read / write): 16.9 GB / 62.8 MB
Host: i-0f6438535f34a7c9a ( spot)

Runtime

Submitted: Jan 28, 2026 12:58:00 PM
Completed: Jan 28, 2026 1:03:21 PM
Total Duration: 5m 20s

Phases

Queue: 17s
Execution: 4m 49s
Stage/Unstage: 14s

Attempt 4

Execution

Status: succeeded
Hash: 1c/3574b4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/3574b423e82feb9c9102b959c3ff8c
Native ID: nf-1c3574b423e82feb9c9102b959c3ff8c-c99d5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.3 / 4
Memory (peak / alloc): 953.6 MB / 8.0 GB
Process I/O (rchar / wchar): 321.9 GB / 10.2 GB
Disk I/O (read / write): 20.3 GB / 470.4 MB
Host: i-0e8fb5e3e89f4f5e2 ( spot)

Runtime

Submitted: Jan 27, 2026 11:23:00 PM
Completed: Jan 28, 2026 12:06:35 AM
Total Duration: 43m 34s

Phases

Queue: 16s
Execution: 43m 5s
Stage/Unstage: 13s

Attempt 3

Execution

Status: succeeded
Hash: 71/3a8d0e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/3a8d0e7b85679db42f37f6ac233810
Native ID: nf-713a8d0e7b85679db42f37f6ac233810-f1c34

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.5 / 4
Memory (peak / alloc): 2.0 GB / 8.0 GB
Process I/O (rchar / wchar): 3.5 GB / 39.3 MB
Disk I/O (read / write): 4.3 GB / 2.8 MB
Host: i-06cfe0d2a72102eb9 ( spot)

Runtime

Submitted: Jan 27, 2026 4:51:33 PM
Completed: Jan 27, 2026 4:52:41 PM
Total Duration: 1m 7s

Phases

Queue: 16s
Execution: 34s
Stage/Unstage: 17s

Attempt 2

Execution

Status: succeeded
Hash: 25/8d224b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/8d224bf34d1bb787bc276057a6bf99
Native ID: nf-258d224bf34d1bb787bc276057a6bf99-184f2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 4
Memory (peak / alloc): 880.9 MB / 8.0 GB
Process I/O (rchar / wchar): 50.9 GB / 1.5 GB
Disk I/O (read / write): 18.4 GB / 90.2 MB
Host: i-08b3ec3207aa3f391 ( spot)

Runtime

Submitted: Jan 27, 2026 3:21:58 PM
Completed: Jan 27, 2026 3:29:40 PM
Total Duration: 7m 41s

Phases

Queue: 18s
Execution: 7m 9s
Stage/Unstage: 14s

Attempt 1

Execution

Status: succeeded
Hash: 34/21d3e3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/34/21d3e3c472c415795c3140d1b94d45
Native ID: nf-3421d3e3c472c415795c3140d1b94d45-bb410

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.3 / 4
Memory (peak / alloc): 1.8 GB / 8.0 GB
Process I/O (rchar / wchar): 6.6 GB / 177.5 MB
Disk I/O (read / write): 6.3 GB / 13.5 MB
Host: i-03c937e5cd1ccb33d ( spot)

Runtime

Submitted: Jan 27, 2026 3:05:08 AM
Completed: Jan 27, 2026 3:06:59 AM
Total Duration: 1m 50s

Phases

Queue: 18s
Execution: 1m 12s
Stage/Unstage: 20s