NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
ENSEMBLVEP_VEP (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper)

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Task Info

Status: succeeded
Hash: f1b7875ecdc1
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;sentieon_haplotyper
Attempts: 4

Attempt 4

Execution

Status: succeeded - cached
Hash: e2/e7be44
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/e7be44629d69aa41b9867c15e663e6
Native ID: nf-e2e7be44629d69aa41b9867c15e663e6-91f54

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.4 / 4
Memory (peak / alloc): 1.0 GB / 8.0 GB
Process I/O (rchar / wchar): 51.9 GB / 1.5 GB
Disk I/O (read / write): 19.2 GB / 91.1 MB
Host: i-0e80aac854e659336 ( spot)

Runtime

Submitted: Jan 27, 2026 4:50:54 PM
Completed: Jan 27, 2026 5:00:16 PM
Total Duration: 9m 21s

Phases

Queue: 22s
Execution: 8m 45s
Stage/Unstage: 14s

Attempt 3

Execution

Status: succeeded
Hash: f1/e51efb
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/e51efbc6ff2e40e1e4086dc8ca4a71
Native ID: nf-f1e51efbc6ff2e40e1e4086dc8ca4a71-de603

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 4
Memory (peak / alloc): 2.7 GB / 8.0 GB
Process I/O (rchar / wchar): 1.7 GB / 25.7 MB
Disk I/O (read / write): 963.0 MB / 1.2 MB
Host: i-0f175a980ffbd2986 ( spot)

Runtime

Submitted: Jan 27, 2026 4:46:15 PM
Completed: Jan 27, 2026 4:47:27 PM
Total Duration: 1m 11s

Phases

Queue: 4s
Execution: 55s
Stage/Unstage: 12s

Attempt 2

Execution

Status: succeeded
Hash: 0d/26ec00
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/26ec001a284da55f023e48fbc0a544
Native ID: nf-0d26ec001a284da55f023e48fbc0a544-8a2a2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 90.3 MB / 8.0 GB
Process I/O (rchar / wchar): 51.5 MB / 566.0 KB
Disk I/O (read / write): 20.1 MB / 48.0 KB
Host: i-0675a2f490e8f1b97 ( spot)

Runtime

Submitted: Jan 27, 2026 3:10:54 PM
Completed: Jan 27, 2026 3:11:34 PM
Total Duration: 39s

Phases

Queue: 22s
Execution: 2s
Stage/Unstage: 15s

Attempt 1

Execution

Status: succeeded
Hash: e7/2b6ebf
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/2b6ebfacd4da4d6a984ef24248bc6a
Native ID: nf-e72b6ebfacd4da4d6a984ef24248bc6a-2b144

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.0 / 4
Memory (peak / alloc): 2.1 GB / 8.0 GB
Process I/O (rchar / wchar): 5.2 GB / 114.5 MB
Disk I/O (read / write): 5.9 GB / 8.6 MB
Host: i-096ef805b2e2b00ee ( spot)

Runtime

Submitted: Jan 27, 2026 2:30:18 AM
Completed: Jan 27, 2026 2:31:40 AM
Total Duration: 1m 21s

Phases

Queue: 16s
Execution: 53s
Stage/Unstage: 12s