NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
VCFTOOLS_TSTV_COUNT (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller)

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Task Info

Status: succeeded
Hash: f71254f07e84
Process: NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;haplotypecaller
Attempts: 5

Attempt 5

Execution

Status: succeeded - cached
Hash: 87/da620b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/da620b625144bdf02ff520ac92bf31
Native ID: nf-87da620b625144bdf02ff520ac92bf31-33b9b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.4 MB / 1.0 GB
Process I/O (rchar / wchar): 28.3 MB / 2.7 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-06cc374899002fef0 ( spot)

Runtime

Submitted: Jan 27, 2026 5:04:34 PM
Completed: Jan 27, 2026 5:04:43 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 3s
Stage/Unstage: 1s

Attempt 4

Execution

Status: succeeded - cached
Hash: 40/cea5e1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/cea5e1a9cadbd848226be5f69ebb83
Native ID: nf-40cea5e1a9cadbd848226be5f69ebb83-ce740

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.5 MB / 1.0 GB
Process I/O (rchar / wchar): 40.5 MB / 2.3 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-07fb9955ddbeec036 ( spot)

Runtime

Submitted: Jan 27, 2026 6:58:02 PM
Completed: Jan 27, 2026 6:58:11 PM
Total Duration: 8s

Phases

Queue: 4s
Execution: 2s
Stage/Unstage: 2s

Attempt 3

Execution

Status: succeeded
Hash: 78/fd0c54
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/fd0c544d86e6be682ca550b0a450f5
Native ID: nf-78fd0c544d86e6be682ca550b0a450f5-8eb2c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 14.5 MB / 1.0 GB
Process I/O (rchar / wchar): 24.5 MB / 2.4 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0f175a980ffbd2986 ( spot)

Runtime

Submitted: Jan 27, 2026 4:46:06 PM
Completed: Jan 27, 2026 4:46:15 PM
Total Duration: 8s

Phases

Queue: 3s
Execution: 2s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded
Hash: c0/01fa90
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/01fa904cf62b93ba673b469655f177
Native ID: nf-c001fa904cf62b93ba673b469655f177-308b8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 1
Memory (peak / alloc): 9.7 MB / 1.0 GB
Process I/O (rchar / wchar): 69.6 KB / 1.7 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 3:08:46 PM
Completed: Jan 27, 2026 3:08:52 PM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 95/002001
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/vcftools:0.1.16--he513fc3_4
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/0020010a12e5c477259cc08fc343a7
Native ID: nf-950020010a12e5c477259cc08fc343a7-0a4e7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.8 / 1
Memory (peak / alloc): 10.1 MB / 2.0 GB
Process I/O (rchar / wchar): 477.4 KB / 1.6 KB
Disk I/O (read / write): - / 12.0 KB
Host: i-0e775db8db0758ab8 ( spot)

Runtime

Submitted: Jan 27, 2026 2:52:58 AM
Completed: Jan 27, 2026 2:53:06 AM
Total Duration: 7s

Phases

Queue: 5s
Execution: -
Stage/Unstage: -