NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33;SNP_GRCh38_hg38_wChr) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
BCFTOOLS_MPILEUP (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: fe37491d293e
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: cb/f02778
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/f02778d5d5d02ea05eaf598f6c33a8
Native ID: nf-cbf02778d5d5d02ea05eaf598f6c33a8-02a25

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 2
Memory (peak / alloc): 591.3 MB / 2.0 GB
Process I/O (rchar / wchar): 115.5 GB / 13.7 MB
Disk I/O (read / write): 115.6 GB / 1.4 MB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 2:53:46 PM
Completed: Jan 27, 2026 3:12:34 PM
Total Duration: 18m 47s

Phases

Queue: 1m 19s
Execution: 13m 17s
Stage/Unstage: 4m 11s

Attempt 1

Execution

Status: succeeded
Hash: 31/a8f1b0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/a8f1b0bfd2c71547e9c3589f60873c
Native ID: nf-31a8f1b0bfd2c71547e9c3589f60873c-a8c7f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 556.3 MB / 2.0 GB
Process I/O (rchar / wchar): 83.4 GB / 13.3 MB
Disk I/O (read / write): 83.4 GB / 1.3 MB
Host: i-096ef805b2e2b00ee ( spot)

Runtime

Submitted: Jan 27, 2026 2:20:18 AM
Completed: Jan 27, 2026 2:32:06 AM
Total Duration: 11m 47s

Phases

Queue: 4s
Execution: 8m 48s
Stage/Unstage: 2m 55s