|
succeeded
|
NFCORE_SAREK:PREPARE_GENOME:MSISENSOR2_SCAN (Homo_sapiens_assembly38.fasta)
|
4m 17s |
1m 18s |
2m 46s |
13s |
387.0 MB |
107% |
3.0 GB |
1.5 GB |
0 bytes |
1.5 GB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_GENOME:UNZIP_ALLELES (G1000_alleles_hg38.zip)
|
1m 25s |
1m 24s |
1s |
0s |
10.9 MB |
106% |
9.8 MB |
30.0 MB |
0 bytes |
30.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_GENOME:UNZIP_GC (GC_G1000_hg38.zip)
|
1m 30s |
1m 23s |
2s |
5s |
11.0 MB |
103% |
100.1 MB |
345.6 MB |
0 bytes |
345.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_GENOME:UNZIP_LOCI (G1000_loci_hg38.zip)
|
1m 28s |
1m 27s |
1s |
0s |
10.9 MB |
101% |
8.3 MB |
33.1 MB |
0 bytes |
33.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_GENOME:UNZIP_RT (RT_G1000_hg38.zip)
|
1m 31s |
1m 22s |
2s |
7s |
10.9 MB |
104% |
101.6 MB |
387.4 MB |
0 bytes |
387.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:CREATE_INTERVALS_BED (wgs_calling_regions_noseconds.hg38.bed)
|
1m 42s |
1m 20s |
- |
- |
2.9 MB |
102% |
56.8 KB |
9.1 KB |
0 bytes |
328.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_COMBINED (wgs_calling_regions_noseconds.hg38;null)
|
2m 22s |
2m 21s |
- |
- |
3.2 MB |
100% |
119.7 KB |
12.1 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr10_124121503-133690466;null)
|
1m 52s |
1m 50s |
- |
- |
3.2 MB |
109% |
108.2 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr10_38573339-38906036;null)
|
1m 15s |
1m 13s |
- |
- |
3.3 MB |
155% |
109.9 KB |
3.5 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr10_47870369-124121200;null)
|
28s |
27s |
- |
- |
3.2 MB |
45% |
108.6 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_10001-207666;null)
|
1m 19s |
1m 18s |
- |
- |
3.3 MB |
49% |
109.0 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_13004385-16799163;null)
|
30s |
29s |
- |
- |
3.2 MB |
63% |
107.1 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_143184588-223558935;null)
|
12s |
11s |
- |
- |
5.8 MB |
32% |
108.9 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr11_51078349-54425074;null)
|
1m 27s |
1m 25s |
- |
- |
3.2 MB |
104% |
109.6 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr11_60001-50821348;null)
|
1m 41s |
1m 39s |
- |
- |
3.1 MB |
52% |
108.9 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr11_71055697-87978202;null)
|
1m 40s |
1m 39s |
- |
- |
3.2 MB |
51% |
108.9 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr11_88002897-135076622;null)
|
58s |
55s |
- |
- |
3.2 MB |
127% |
109.0 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr12_10001-7083650;null)
|
59s |
58s |
- |
- |
3.2 MB |
76% |
109.4 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_223608936-228558364;null)
|
35s |
34s |
- |
- |
3.1 MB |
60% |
107.8 KB |
3.5 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr12_34829238-37185252;null)
|
1m 6s |
1m 4s |
- |
- |
3.4 MB |
114% |
109.6 KB |
3.5 KB |
0 bytes |
12.0 KB |
1 |