NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;manta) - mipeters-sarek-largest2-smallest2-tn-pairs-697d00c4 - Workflow Tracker

Runs
mipeters-sar..rs-697d00c4
Tasks
BCFTOOLS_ANNOTATE (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;manta)

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Task Info

Status: succeeded
Hash: b03a4eaa5530
Process: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE
Tag: 1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;manta
Attempts: 3

Attempt 3

Execution

Status: succeeded - cached
Hash: 4b/d0f406
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/d0f4060dc5a0d5db48883ba420c8ca
Native ID: nf-4bd0f4060dc5a0d5db48883ba420c8ca-908bc

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 11.0 / 1
Memory (peak / alloc): 286.0 MB / 1.0 GB
Process I/O (rchar / wchar): 38.8 MB / 28.5 KB
Disk I/O (read / write): - / 36.0 KB
Host: i-02cf58e9633aa925e ( spot)

Runtime

Submitted: Jan 29, 2026 1:00:18 PM
Completed: Jan 29, 2026 1:00:30 PM
Total Duration: 11s

Phases

Queue: 7s
Execution: 2s
Stage/Unstage: 2s

Attempt 2

Execution

Status: succeeded - cached
Hash: a0/349e48
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/349e481ad3972014a576c5f06f1ace
Native ID: nf-a0349e481ad3972014a576c5f06f1ace-fcb71

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.5 / 1
Memory (peak / alloc): 391.3 MB / 1.0 GB
Process I/O (rchar / wchar): 403.1 MB / 179.9 MB
Disk I/O (read / write): - / 180.1 MB
Host: i-02a965e647970d916 ( spot)

Runtime

Submitted: Jan 29, 2026 2:45:39 PM
Completed: Jan 29, 2026 2:46:06 PM
Total Duration: 26s

Phases

Queue: 2s
Execution: 20s
Stage/Unstage: 4s

Attempt 1

Execution

Status: succeeded
Hash: bf/e8179b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/e8179b3d8d11ad4a5aee50fd4410c9
Native ID: nf-bfe8179b3d8d11ad4a5aee50fd4410c9-df313

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 5.2 / 1
Memory (peak / alloc): 389.5 MB / 1.0 GB
Process I/O (rchar / wchar): 104.3 MB / 32.9 MB
Disk I/O (read / write): - / 33.0 MB
Host: i-0827087d6816e255e ( spot)

Runtime

Submitted: Jan 29, 2026 1:11:38 PM
Completed: Jan 29, 2026 1:11:50 PM
Total Duration: 11s

Phases

Queue: 4s
Execution: 5s
Stage/Unstage: 2s