|
succeeded
|
NFCORE_SAREK:PREPARE_GENOME:MSISENSOR2_SCAN (Homo_sapiens_assembly38.fasta)
|
2m 34s |
4s |
2m 16s |
14s |
386.9 MB |
100% |
3.0 GB |
1.5 GB |
0 bytes |
1.5 GB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:CREATE_INTERVALS_BED (wgs_calling_regions_noseconds.hg38.bed)
|
24s |
4s |
- |
- |
2.9 MB |
140% |
56.0 KB |
9.1 KB |
0 bytes |
284.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_COMBINED (wgs_calling_regions_noseconds.hg38;null)
|
5s |
4s |
- |
- |
3.3 MB |
85% |
116.5 KB |
12.1 KB |
0 bytes |
16.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr10_124121503-133690466;null)
|
3s |
2s |
- |
- |
3.3 MB |
105% |
106.4 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr10_38573339-38906036;null)
|
6s |
5s |
- |
- |
3.2 MB |
50% |
105.9 KB |
3.6 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_10001-207666;null)
|
4s |
3s |
- |
- |
3.3 MB |
97% |
105.4 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_13004385-16799163;null)
|
9s |
8s |
- |
- |
3.2 MB |
49% |
105.3 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_143184588-223558935;null)
|
4s |
3s |
- |
- |
3.4 MB |
53% |
105.4 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr11_51078349-54425074;null)
|
5s |
4s |
- |
- |
3.2 MB |
93% |
105.5 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr11_60001-50821348;null)
|
14s |
13s |
- |
- |
3.2 MB |
103% |
105.3 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr11_71055697-87978202;null)
|
5s |
4s |
- |
- |
3.2 MB |
62% |
109.4 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr11_88002897-135076622;null)
|
5s |
4s |
- |
- |
3.2 MB |
51% |
105.5 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr12_10001-7083650;null)
|
4s |
3s |
- |
- |
3.3 MB |
110% |
105.4 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_223608936-228558364;null)
|
5s |
4s |
- |
- |
3.3 MB |
105% |
105.5 KB |
3.5 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr12_34769408-34822289;null)
|
4s |
3s |
- |
- |
3.3 MB |
52% |
106.5 KB |
3.5 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_29553836-121976459;null)
|
3s |
2s |
- |
- |
3.3 MB |
102% |
106.5 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr13_111843442-113673020;null)
|
6s |
5s |
- |
- |
3.2 MB |
91% |
110.3 KB |
3.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr13_16000001-18051248;null)
|
4s |
3s |
- |
- |
3.2 MB |
92% |
105.6 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr13_86252980-111703855;null)
|
4s |
3s |
- |
- |
3.3 MB |
108% |
105.4 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr15_17000001-19725254;null)
|
4s |
3s |
- |
- |
3.3 MB |
91% |
105.5 KB |
3.5 KB |
0 bytes |
12.0 KB |
1 |