Process Directives

Container
292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/ensembl-vep:113.0--pl5321h2a3209d_0
CPU / Memory
4 / 8.0 GB

Tasks

484 succeeded

CPU Usage(cores)

Peak Memory(GB)

rchar(GB)

wchar(MB)

read_bytes(GB)

write_bytes(MB)

Total Duration(m)

Queue(s)

Execution(m)

Stage/Unstage(s)

Clear
succeeded 1029_032-N1-BDNA-1_2375WFLT3_s01;haplotypecaller 1m 46s 13s 56s 37s 2.0 GB 404% 5.2 GB 114.6 MB 5.2 GB 8.6 MB 1
succeeded 1029_032-N1-BDNA-1_2375WFLT3_s01;manta 1m 2s -1s 7s 56s 314.6 MB 99% 192.2 MB 1.6 MB 187.0 MB 108.0 KB 1
succeeded 1029_032-N1-BDNA-1_2375WFLT3_s01;sentieon_haplotyper 1m 18s 5s 54s 19s 2.0 GB 401% 5.2 GB 116.1 MB 5.3 GB 8.6 MB 1
succeeded 1029_032-N1-BDNA-1_2375WFLT3_s01;strelka 1m 39s -1s 57s 43s 2.0 GB 396% 5.0 GB 101.1 MB 5.2 GB 7.7 MB 1
succeeded 1029_032-T1-TDNA-1_23FC2GLT4_s01_vs_1029_032-N1-BDNA-1_2375WFLT3_s01;manta 36s 14s 5s 17s 224.6 MB 99% 141.3 MB 1.3 MB 129.1 MB 88.0 KB 1
succeeded 1029_032-T1-TDNA-1_23FC2GLT4_s01_vs_1029_032-N1-BDNA-1_2375WFLT3_s01;manta 39s 16s 7s 16s 333.1 MB 99% 214.9 MB 1.7 MB 214.2 MB 108.0 KB 1
succeeded 1029_032-T1-TDNA-1_23FC2GLT4_s01_vs_1029_032-N1-BDNA-1_2375WFLT3_s01;mutect2 47s 3s 36s 8s 983.6 MB 245% 2.5 GB 35.0 MB 2.8 GB 2.5 MB 1
succeeded 1029_032-T1-TDNA-1_23FC2GLT4_s01_vs_1029_032-N1-BDNA-1_2375WFLT3_s01;mutect2 47s 2s 36s 9s 977.7 MB 245% 2.5 GB 35.0 MB 2.8 GB 2.5 MB 1
succeeded 1029_032-T1-TDNA-1_23FC2GLT4_s01_vs_1029_032-N1-BDNA-1_2375WFLT3_s01;strelka 1m 0s 3s 47s 10s 1.8 GB 342% 3.8 GB 57.2 MB 5.0 GB 4.2 MB 1
succeeded 1029_032-T1-TDNA-1_23FC2GLT4_s01_vs_1029_032-N1-BDNA-1_2375WFLT3_s01;strelka 1m 2s 17s 34s 11s 933.4 MB 147% 1.5 GB 8.4 MB 2.0 GB 700.0 KB 1
succeeded 1029_032-T1-TDNA-1_23FC2GLT4_s01_vs_1029_032-N1-BDNA-1_2375WFLT3_s01;tnseq 1m 47s 2s 1m 33s 12s 2.1 GB 406% 5.2 GB 129.0 MB 6.0 GB 10.1 MB 1
succeeded 1029_05O-N1-BDNA-1_2375WFLT3_s02;haplotypecaller 1m 28s 3s 1m 7s 18s 2.0 GB 387% 5.0 GB 109.0 MB 6.3 GB 8.4 MB 1
succeeded 1029_05O-N1-BDNA-1_2375WFLT3_s02;manta 1m 27s 15s 9s 1m 3s 267.7 MB 100% 192.6 MB 1.6 MB 202.7 MB 120.0 KB 1
succeeded 1029_05O-N1-BDNA-1_2375WFLT3_s02;sentieon_haplotyper 1m 7s 3s 55s 9s 2.1 GB 397% 5.0 GB 110.2 MB 6.1 GB 8.4 MB 1
succeeded 1029_05O-N1-BDNA-1_2375WFLT3_s02;strelka 2m 26s 12s 1m 10s 1m 4s 2.1 GB 401% 4.9 GB 97.0 MB 6.1 GB 7.5 MB 1
succeeded 1029_05O-T1-TDNA-1_23FC2GLT4_s02_vs_1029_05O-N1-BDNA-1_2375WFLT3_s02;manta 19s 4s 1s 14s 88.1 MB 98% 29.6 MB 2.2 MB 14.0 MB 136.0 KB 1
succeeded 1029_05O-T1-TDNA-1_23FC2GLT4_s02_vs_1029_05O-N1-BDNA-1_2375WFLT3_s02;manta 18s 3s 6s 9s 324.0 MB 99% 208.8 MB 1.6 MB 230.1 MB 104.0 KB 1
succeeded 1029_05O-T1-TDNA-1_23FC2GLT4_s02_vs_1029_05O-N1-BDNA-1_2375WFLT3_s02;mutect2 47s 2s 34s 11s 1008.1 MB 222% 2.2 GB 26.7 MB 2.6 GB 1.9 MB 1
succeeded 1029_05O-T1-TDNA-1_23FC2GLT4_s02_vs_1029_05O-N1-BDNA-1_2375WFLT3_s02;mutect2 46s 2s 34s 10s 1007.9 MB 222% 2.2 GB 26.7 MB 2.6 GB 1.9 MB 1
succeeded 1029_05O-T1-TDNA-1_23FC2GLT4_s02_vs_1029_05O-N1-BDNA-1_2375WFLT3_s02;strelka 50s 4s 33s 13s 935.3 MB 135% 1.3 GB 7.0 MB 1.6 GB 576.0 KB 1
484 items found |
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