1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.tnseq.filtered_custom.ann_snpEff_VEP.ann.vars.txt

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Filename: 1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.tnseq.filtered_custom.ann_snpEff_VEP.ann.vars.txt
Full Path: s3://natera-rnd-pltf-dev-nextflow-data-01/users/mipeters/semiproductionize/sarek/69814f07/std_run_largest2_smallest2_8a99ba01/variant_calling/tmb/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.tnseq.filtered_custom.ann_snpEff_VEP.ann.vars.txt
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Workflow Run: mipeters-std-largest2-smallest2-69814f07
Published: Feb 02, 2026 6:43 PM
Content

CHROM,POS,REF,ALT,IMPACT,CONSEQUENCE,IS_NON_SYNONYMOUS,TUMOR_GT,NORMAL_GT,TUMOR_VAF
chr1,952025,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.325000
chr1,973969,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.336000
chr1,1045749,CC,TT,HIGH,stop_gained,TRUE,0/1,0/0,0.324000
chr1,1205381,A,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.294000
chr1,1205384,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.294000
chr1,1312632,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.362000
chr1,1332987,GG,AA,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.366000
chr1,1439747,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.413000
chr1,1623465,C,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.337000
chr1,1925809,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr1,1972974,T,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr1,2496642,G,A,"MODERATE,MODIFIER,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.307000
chr1,2502334,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.367000
chr1,3425654,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.349000
chr1,3431000,C,A,HIGH,stop_gained,TRUE,0/1,0/0,0.381000
chr1,3432046,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.334000
chr1,3501901,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.365000
chr1,3509917,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.355000
chr1,6125148,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.333000
chr1,6219325,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.379000
chr1,6294902,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.323000
chr1,6473076,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.400000
chr1,6586023,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.333000
chr1,7744852,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.316000
chr1,7920848,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.313000
chr1,7939895,C,A,"MODERATE,MODIFIER",missense_variant;splice_region_variant;upstream_gene_variant,TRUE,0/1,0/0,0.380000
chr1,8014186,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.357000
chr1,8335516,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.375000
chr1,8967679,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.340000
chr1,9026309,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.317000
chr1,9573361,C,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.378000
chr1,9602155,C,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.347000
chr1,9773276,A,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.332000
chr1,10323948,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.359000
chr1,10642997,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.368000
chr1,10949643,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.362000
chr1,11030205,C,G,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant,TRUE,0/1,0/0,0.331000
chr1,11045429,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.335000
chr1,11046691,C,A,HIGH,stop_gained,TRUE,0/1,0/0,0.340000
chr1,11167472,T,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.359000
chr1,11514518,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.354000
chr1,11706521,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.353000
chr1,12097125,C,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.294000
chr1,12276190,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.352000
chr1,12277753,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.379000
chr1,12283392,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.363000
chr1,12304656,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.334000
chr1,12568347,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.348000
chr1,12725763,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.347000
chr1,12777301,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.349000
chr1,12777516,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.304000
chr1,12847677,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.375000
chr1,12920249,C,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.162000
chr1,13115613,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.368000
chr1,13115895,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.379000
chr1,13116105,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.283000
chr1,13343003,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.363000
chr1,13369321,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.298000
chr1,13392453,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.321000
chr1,13421166,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.346000
chr1,13781052,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.365000
chr1,15442551,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.310000
chr1,15443498,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.281000
chr1,15518377,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.380000
chr1,15732646,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER",intragenic_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.345000
chr1,15767460,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.359000
chr1,15774823,GG,AA,HIGH,stop_gained,TRUE,0/1,0/0,0.355000
chr1,15876630,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.345000
chr1,16024807,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.329000
chr1,16029134,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.328000
chr1,16052342,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.350000
chr1,16052406,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.316000
chr1,16062522,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.294000
chr1,16960760,CC,TT,HIGH,splice_region_variant;stop_gained,TRUE,0/1,0/0,0.341000
chr1,16976917,G,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.328000
chr1,17105053,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.342000
chr1,17276646,C,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.351000
chr1,17331070,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.367000
chr1,18291878,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.332000
chr1,18365506,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.346000
chr1,18377408,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.327000
chr1,18481984,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.346000
chr1,18849508,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.211000
chr1,19113824,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.412000
chr1,19117831,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.368000
chr1,19657044,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.365000
chr1,20312925,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.363000
chr1,20323510,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.334000
chr1,20332875,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.334000
chr1,20343271,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.401000
chr1,20589212,C,A,HIGH,stop_gained,TRUE,0/1,0/0,0.304000
chr1,20638097,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.340000
chr1,20672169,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.337000
chr1,20690263,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.342000
chr1,20765477,G,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.366000
chr1,21445138,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.323000
chr1,21613639,GG,AC,HIGH,stop_gained,TRUE,0/1,0/0,0.303000
chr1,21701500,G,A,HIGH,splice_region_variant;stop_gained,TRUE,0/1,0/0,0.360000
chr1,21757686,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.322000
chr1,21831491,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.362000
chr1,22003014,G,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.335000
chr1,22081737,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.334000
chr1,22086705,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.308000
chr1,22910488,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.338000
chr1,23193143,A,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.351000
chr1,23310663,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.359000
chr1,23437458,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.300000
chr1,23793732,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.360000
chr1,23817478,GG,AA,HIGH,splice_region_variant;stop_gained,TRUE,0/1,0/0,0.314000
chr1,24061982,C,T,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.333000
chr1,24090986,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.303000
chr1,24456141,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.321000
chr1,25686501,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.323000
chr1,25746739,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.346000
chr1,25885794,G,A,"MODERATE,MODIFIER,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.363000
chr1,26255842,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.340000
chr1,26363108,A,T,"HIGH,MODIFIER",stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.310000
chr1,26426352,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.362000
chr1,26555605,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.323000
chr1,26696716,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.311000
chr1,26732685,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.320000
chr1,26772614,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.329000
chr1,27322203,GG,AA,"MODERATE,MODIFIER,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.328000
chr1,27362178,A,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.374000
chr1,27841070,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.312000
chr1,28150995,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.358000
chr1,28696976,T,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.318000
chr1,29033143,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.421000
chr1,29282692,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.314000
chr1,29323467,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.327000
chr1,30974764,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.328000
chr1,31800527,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.333000
chr1,31919002,G,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.326000
chr1,32092005,C,A,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.349000
chr1,33331440,GG,AA,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant,TRUE,0/1,0/0,0.334000
chr1,33494382,CC,TT,MODERATE,missense_variant,TRUE,0/1,0/0,0.343000
chr1,33577404,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.350000
chr1,33580859,CC,TT,MODERATE,missense_variant,TRUE,0/1,0/0,0.309000
chr1,33617558,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.322000
chr1,33716307,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.345000
chr1,33864445,G,A,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.326000
chr1,34794570,GG,AA,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.372000
chr1,34795109,G,A,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.309000
chr1,34899701,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.323000
chr1,34904376,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.374000
chr1,35113949,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.332000
chr1,35560677,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.309000
chr1,35736572,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.309000
chr1,35760693,G,A,HIGH,stop_gained,TRUE,0/1,0/0,0.349000
chr1,35841386,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.343000
chr1,36099433,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.341000
chr1,36319971,GG,AA,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.348000
chr1,36432487,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.345000
chr1,36825769,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.343000
chr1,37629657,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.368000
chr1,37719450,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.342000
chr1,37822288,G,A,HIGH,stop_gained,TRUE,0/1,0/0,0.344000
chr1,39434586,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.312000
chr1,39565174,G,A,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;non_coding_transcript_exon_variant,TRUE,0/1,0/0,0.338000
chr1,39627132,A,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.330000
chr1,39630245,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.337000
chr1,39770478,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.323000
chr1,40292505,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.329000
chr1,40514773,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.365000
chr1,40749622,T,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.352000
chr1,41580354,C,G,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.332000
chr1,41580780,G,A,"HIGH,MODIFIER",downstream_gene_variant;stop_gained,TRUE,0/1,0/0,0.347000
chr1,41583360,CG,AA,"HIGH,MODIFIER",downstream_gene_variant;stop_gained,TRUE,0/1,0/0,0.359000
chr1,41584399,G,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.333000
chr1,41584700,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.360000
chr1,42191473,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.351000
chr1,42414888,A,C,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.310000
chr1,42430750,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.315000
chr1,42700839,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.311000
chr1,43219462,G,A,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.338000
chr1,43282819,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.341000
chr1,43319325,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.317000
chr1,43590987,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.325000
chr1,44000850,G,A,"HIGH,MODIFIER",downstream_gene_variant;stop_gained,TRUE,0/1,0/0,0.359000
chr1,44138694,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.325000
chr1,44829219,CC,TT,MODERATE,missense_variant,TRUE,0/1,0/0,0.332000
chr1,45495150,G,A,"MODERATE,MODIFIER,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.314000
chr1,45621932,GG,AA,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.297000
chr1,46189512,A,T,"HIGH,MODIFIER",downstream_gene_variant;stop_gained,TRUE,0/1,0/0,0.347000
chr1,46394505,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.350000
chr1,46406060,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.347000
chr1,46511203,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr1,46813565,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.357000
chr1,46813979,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.357000
chr1,46934191,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.369000
chr1,47036027,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.342000
chr1,47038687,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.348000
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chr5,112862524,C,T,"MODERATE,MODIFIER",missense_variant;non_coding_transcript_exon_variant,TRUE,0/1,0/0,0.323000
chr5,113434478,G,A,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant;non_coding_transcript_exon_variant,TRUE,0/1,0/0,0.348000
chr5,113584311,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.326000
chr5,115130613,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.326000
chr5,115130620,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.369000
chr5,115141374,C,T,MODERATE,missense_variant;splice_region_variant,TRUE,0/1,0/0,0.349000
chr5,115580937,T,A,"MODERATE,MODERATE",missense_variant,TRUE,0/1,0/0,0.342000
chr5,116058731,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.345000
chr5,116058783,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.334000
chr5,118841078,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.296000
chr5,119634095,C,G,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.357000
chr5,120686566,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.358000
chr5,122403853,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.343000
chr5,122450699,A,G,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.341000
chr5,122450802,C,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.358000
chr5,122451021,C,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.350000
chr5,122451147,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.349000
chr5,123099705,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.282000
chr5,127524571,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.339000
chr5,127553809,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.320000
chr5,127707712,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.330000
chr5,128272026,G,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.322000
chr5,128276073,CC,TT,MODERATE,missense_variant,TRUE,0/1,0/0,0.330000
chr5,128312753,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.338000
chr5,128332933,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.350000
chr5,128966198,A,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.348000
chr5,129765020,C,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.343000
chr5,131479706,G,A,"MODERATE,MODERATE",missense_variant,TRUE,0/1,0/0,0.315000
chr5,131706418,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.352000
chr5,131851281,C,T,"MODERATE,MODIFIER,MODIFIER",3_prime_UTR_variant;missense_variant;non_coding_transcript_exon_variant,TRUE,0/1,0/0,0.368000
chr5,131989469,G,A,"HIGH,MODIFIER",non_coding_transcript_exon_variant;stop_gained,TRUE,0/1,0/0,0.350000
chr5,132060749,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr5,132271425,C,T,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.361000
chr5,132588795,C,T,"MODERATE,MODERATE",missense_variant,TRUE,0/1,0/0,0.323000
chr5,132609198,G,A,"MODERATE,MODERATE",missense_variant,TRUE,0/1,0/0,0.331000
chr5,132638111,C,T,"MODERATE,MODERATE,MODIFIER",missense_variant;non_coding_transcript_exon_variant,TRUE,0/1,0/0,0.342000
chr5,132747682,GG,AA,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.335000
chr5,132824108,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.353000
chr5,132862448,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.388000
chr5,132897044,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.361000
chr5,134559861,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.327000
chr5,134562282,T,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.350000
chr5,134811330,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.346000
chr5,135446424,G,A,"MODERATE,MODIFIER,MODIFIER",3_prime_UTR_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.342000
chr5,135871607,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.409000
chr5,135947351,C,A,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant,TRUE,0/1,0/0,0.382000
chr5,136044083,G,T,HIGH,stop_gained,TRUE,0/1,0/0,0.365000
chr5,136056781,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.335000
chr5,136266251,CC,TT,HIGH,stop_gained,TRUE,0/1,0/0,0.348000
chr5,136356940,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.364000
chr5,137709773,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.330000
chr5,138167946,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.329000
chr5,138182341,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.341000
chr5,138253313,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.312000
chr5,138512819,A,T,HIGH,stop_gained,TRUE,0/1,0/0,0.394000
chr5,139051035,G,A,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.329000
chr5,139325491,G,A,"MODERATE,MODERATE",missense_variant,TRUE,0/1,0/0,0.342000
chr5,139377414,T,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.362000
chr5,139394901,G,A,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.351000
chr5,139422781,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.278000
chr5,139813617,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.381000
chr5,140632427,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.334000
chr5,140677987,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.359000
chr5,140786534,G,A,"MODERATE,MODIFIER",missense_variant;non_coding_transcript_exon_variant,TRUE,0/1,0/0,0.319000
chr5,140795413,C,T,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.451000
chr5,140795880,G,A,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.390000
chr5,140796207,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.327000
chr5,140796537,C,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.355000
chr5,140809059,GG,AA,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.317000
chr5,140828990,G,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.327000
chr5,140829724,CT,AA,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.340000
chr5,140842612,G,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.691000
chr5,140869174,G,A,"HIGH,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.347000
chr5,140875500,G,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant;non_coding_transcript_exon_variant,TRUE,0/1,0/0,0.383000
chr5,140876295,G,T,"HIGH,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.338000
chr5,140876353,C,A,"HIGH,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.406000
chr5,140876455,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.346000
chr5,140929161,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.360000
chr5,140967757,T,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.347000
chr5,141095010,A,T,"HIGH,MODIFIER",non_coding_transcript_exon_variant;stop_gained,TRUE,0/1,0/0,0.351000
chr5,141100929,G,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.390000
chr5,141173410,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.343000
chr5,141175207,T,A,"HIGH,MODIFIER,MODIFIER,MODIFIER",intragenic_variant;stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.320000
chr5,141193417,C,T,"HIGH,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;intron_variant;stop_gained,TRUE,0/1,0/0,0.347000
chr5,141193831,G,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.335000
chr5,141194079,C,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;intron_variant;missense_variant;non_coding_transcript_exon_variant,TRUE,0/1,0/0,0.376000
chr5,141200456,G,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.391000
chr5,141200619,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.387000
chr5,141225858,G,A,"MODERATE,MODIFIER,MODIFIER",intragenic_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.348000
chr5,141355436,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.342000
chr5,141356902,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.388000
chr5,141361427,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.356000
chr5,141370551,G,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.352000
chr5,141383357,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.356000
chr5,141404298,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.369000
chr5,141404654,CC,TT,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.350000
chr5,141404703,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.351000
chr5,141409496,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.318000
chr5,141421972,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.367000
chr5,141478484,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.353000
chr5,141577500,A,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.382000
chr5,141583257,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.366000
chr5,141646611,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.313000
chr5,141673028,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.333000
chr5,141673109,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr5,141955966,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.320000
chr5,144206961,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.331000
chr5,144207015,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.314000
chr5,145938105,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr5,146590110,G,A,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.319000
chr5,147375111,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.341000
chr5,147618108,GG,AA,"HIGH,MODIFIER",intron_variant;stop_gained,TRUE,0/1,0/0,0.348000
chr5,147824674,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.340000
chr5,148089530,G,T,"HIGH,MODIFIER",intragenic_variant;stop_gained,TRUE,0/1,0/0,0.354000
chr5,148101811,A,G,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.291000
chr5,148116453,G,A,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.346000
chr5,148242838,G,T,"HIGH,MODIFIER",intragenic_variant;stop_gained,TRUE,0/1,0/0,0.353000
chr5,148550151,C,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.324000
chr5,149244977,C,T,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.323000
chr5,149978230,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.366000
chr5,150036862,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.357000
chr5,150080180,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.351000
chr5,150117676,C,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.317000
chr5,150194813,GG,AA,HIGH,stop_gained,TRUE,0/1,0/0,0.331000
chr5,150205620,G,A,HIGH,stop_gained,TRUE,0/1,0/0,0.349000
chr5,150223120,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.355000
chr5,150298142,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.341000
chr5,150648628,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.349000
chr5,150848441,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.338000
chr5,151117758,CG,C,HIGH,frameshift_variant;splice_region_variant,TRUE,0/1,0/0,0.324000
chr5,151199012,CA,TG,MODERATE,missense_variant,TRUE,0/1,0/0,0.330000
chr5,151201638,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.315000
chr5,151505758,C,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.302000
chr5,151568802,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.348000
chr5,152392408,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.310000
chr5,152395534,G,A,"HIGH,MODIFIER",intron_variant;stop_gained,TRUE,0/1,0/0,0.307000
chr5,153677055,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.369000
chr5,153699052,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.335000
chr5,153705955,G,T,HIGH,stop_gained,TRUE,0/1,0/0,0.335000
chr5,153706061,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr5,154380553,CC,TT,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.407000
chr5,155014586,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr5,155015742,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.360000
chr5,157162533,GG,AA,"HIGH,MODIFIER",intragenic_variant;stop_gained,TRUE,0/1,0/0,0.305000
chr5,157165685,C,T,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.354000
chr5,157228345,A,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.305000
chr5,157471789,G,A,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.340000
chr5,157496985,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.339000
chr5,157638630,G,A,HIGH,stop_gained,TRUE,0/1,0/0,0.317000
chr5,157743893,CC,TT,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.352000
chr5,160092872,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.355000
chr5,160093257,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.342000
chr5,160354804,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.352000
chr5,160393888,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.391000
chr5,160620734,C,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.327000
chr5,160622580,T,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.327000
chr5,161331080,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.350000
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chr17,56353842,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.382000
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chr17,57106993,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.323000
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chr19,51003120,C,A,"MODERATE,MODIFIER,MODIFIER,MODIFIER",intragenic_variant;missense_variant;non_coding_transcript_exon_variant;upstream_gene_variant,TRUE,0/1,0/0,0.330000
chr19,51017187,G,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.325000
chr19,51081570,TG,GT,MODERATE,missense_variant,TRUE,0/1,0/0,0.328000
chr19,51125332,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.310000
chr19,51127230,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.342000
chr19,51380572,A,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.345000
chr19,51415325,CC,TT,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.359000
chr19,51452633,C,T,MODERATE,missense_variant;splice_region_variant,TRUE,0/1,0/0,0.356000
chr19,51458239,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.363000
chr19,51500099,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.358000
chr19,51501676,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.349000
chr19,51530845,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.327000
chr19,51628016,G,A,"MODERATE,MODERATE",missense_variant,TRUE,0/1,0/0,0.323000
chr19,51643637,G,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.333000
chr19,51713650,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.351000
chr19,51769271,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant,TRUE,0/1,0/0,0.357000
chr19,51769658,G,A,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant,TRUE,0/1,0/0,0.363000
chr19,51969116,C,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.347000
chr19,52437830,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.350000
chr19,52510874,C,G,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.384000
chr19,53014904,A,T,"HIGH,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;stop_gained,TRUE,0/1,0/0,0.348000
chr19,53238220,C,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.352000
chr19,53258586,T,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.347000
chr19,53266894,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.387000
chr19,53381486,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.333000
chr19,53636791,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.351000
chr19,53805285,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.341000
chr19,53810005,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.340000
chr19,53810242,T,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.349000
chr19,53823945,A,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.312000
chr19,54012149,G,A,HIGH,stop_gained,TRUE,0/1,0/0,0.372000
chr19,54042182,CC,TT,MODERATE,missense_variant,TRUE,0/1,0/0,0.324000
chr19,54145699,CC,TA,MODERATE,missense_variant,TRUE,0/1,0/0,0.334000
chr19,54278924,G,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.419000
chr19,54279931,C,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.375000
chr19,54462710,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.342000
chr19,54463070,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.327000
chr19,54633303,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.271000
chr19,54663835,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.322000
chr19,54664336,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.374000
chr19,54743984,T,C,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.184000
chr19,54939086,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.339000
chr19,54940418,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.371000
chr19,54940450,CC,TT,HIGH,stop_gained,TRUE,0/1,0/0,0.360000
chr19,54983584,C,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.364000
chr19,54990032,T,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.321000
chr19,55151851,T,G,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.346000
chr19,55159921,G,A,"HIGH,MODIFIER,MODIFIER,MODIFIER",non_coding_transcript_exon_variant;stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.360000
chr19,55174647,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.318000
chr19,55366173,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.330000
chr19,55455002,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.323000
chr19,55482769,C,T,"HIGH,MODIFIER",stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.354000
chr19,55489530,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.349000
chr19,55518669,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.403000
chr19,55529909,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.329000
chr19,55593165,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.323000
chr19,55668539,C,T,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.320000
chr19,55669652,C,T,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.337000
chr19,55688924,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.325000
chr19,55732897,C,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.356000
chr19,55733149,CC,TT,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.364000
chr19,55762945,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.079200
chr19,55772949,C,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.412000
chr19,55801579,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.345000
chr19,55801684,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.341000
chr19,55817991,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.347000
chr19,55818164,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.368000
chr19,55858540,G,T,HIGH,stop_gained,TRUE,0/1,0/0,0.354000
chr19,55861519,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.337000
chr19,55881544,CC,TT,MODERATE,missense_variant,TRUE,0/1,0/0,0.330000
chr19,55911875,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.332000
chr19,55932164,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.368000
chr19,55955535,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.361000
chr19,56027126,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.344000
chr19,56027917,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.350000
chr19,56028205,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.380000
chr19,56032772,A,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.189000
chr19,56041053,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.338000
chr19,56208473,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.325000
chr19,56414357,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.354000
chr19,56424099,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.451000
chr19,56665069,C,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.365000
chr19,56775229,C,T,"MODERATE,MODIFIER,MODIFIER",intragenic_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.346000
chr19,57155356,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.361000
chr19,57160716,T,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.295000
chr19,57420294,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.361000
chr19,57420814,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.382000
chr19,57493414,C,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.360000
chr19,57538286,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant,TRUE,0/1,0/0,0.367000
chr19,57677956,G,A,"MODERATE,MODIFIER,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.374000
chr19,57687287,G,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.367000
chr19,58212766,C,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.345000
chr19,58351550,G,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant;non_coding_transcript_exon_variant;upstream_gene_variant,TRUE,0/1,0/0,0.350000
chr19,58351556,C,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;intragenic_variant;missense_variant;non_coding_transcript_exon_variant;upstream_gene_variant,TRUE,0/1,0/0,0.341000
chr19,58416975,C,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.375000
chr20,765531,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.257000
chr20,765584,A,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.254000
chr20,1254362,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.224000
chr20,1304990,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.238000
chr20,1630292,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.239000
chr20,1635270,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.552000
chr20,1636230,C,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.469000
chr20,2311061,G,T,"HIGH,HIGH",stop_gained,TRUE,0/1,0/0,0.269000
chr20,2483947,GG,AA,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.276000
chr20,2536640,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.229000
chr20,2654907,C,T,"HIGH,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.503000
chr20,2660798,G,T,"MODERATE,MODIFIER,MODIFIER,MODIFIER,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.755000
chr20,2707965,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.208000
chr20,2794301,G,GA,HIGH,frameshift_variant,TRUE,0/1,0/0,0.252000
chr20,2816754,G,A,"MODERATE,LOW,MODIFIER",downstream_gene_variant;missense_variant;synonymous_variant,TRUE,0/1,0/0,0.265000
chr20,2836303,C,A,"HIGH,MODIFIER",stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.502000
chr20,3071722,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.492000
chr20,3110257,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.505000
chr20,3298037,A,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.304000
chr20,3693593,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.533000
chr20,3694481,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.249000
chr20,3701594,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.512000
chr20,3935021,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.455000
chr20,4862004,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.250000
chr20,4862797,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.209000
chr20,5922712,G,T,HIGH,stop_gained,TRUE,0/1,0/0,0.269000
chr20,5922928,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.261000
chr20,5923034,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.237000
chr20,5923453,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.514000
chr20,6050858,G,A,HIGH,stop_gained,TRUE,0/1,0/0,0.235000
chr20,6110457,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.488000
chr20,6778610,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.242000
chr20,8881710,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.247000
chr20,9401534,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.192000
chr20,9468613,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.234000
chr20,9580558,C,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.247000
chr20,9580735,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.269000
chr20,10043304,C,T,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.504000
chr20,10049537,C,T,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.267000
chr20,10049818,G,A,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.256000
chr20,10054588,A,T,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.549000
chr20,10658717,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.285000
chr20,13849490,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.520000
chr20,13850236,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.251000
chr20,15885766,G,A,MODERATE,missense_variant;splice_region_variant,TRUE,0/1,0/0,0.456000
chr20,17948957,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.221000
chr20,18162095,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.530000
chr20,18162731,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.249000
chr20,18494042,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.247000
chr20,18814179,A,G,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.509000
chr20,20090965,G,A,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.245000
chr20,20526353,T,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.260000
chr20,21396162,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.520000
chr20,21706638,GG,AA,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.537000
chr20,22582041,G,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.227000
chr20,22582860,C,T,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.533000
chr20,23084445,A,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.246000
chr20,25209855,C,T,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.517000
chr20,25278391,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.237000
chr20,31933828,A,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.516000
chr20,31996608,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.256000
chr20,32160097,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.224000
chr20,32787301,C,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.229000
chr20,32961344,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.240000
chr20,33241433,C,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.484000
chr20,33291015,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.252000
chr20,33370540,G,A,HIGH,stop_gained,TRUE,0/1,0/0,0.487000
chr20,33663730,G,A,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.244000
chr20,33753285,CC,TT,"HIGH,MODIFIER",stop_gained;upstream_gene_variant,TRUE,0/1,0/0,0.270000
chr20,34742375,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.245000
chr20,34750499,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.507000
chr20,34990051,A,C,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.506000
chr20,35118690,G,A,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.242000
chr20,35254653,G,A,"MODERATE,MODIFIER",intragenic_variant;missense_variant,TRUE,0/1,0/0,0.490000
chr20,35394095,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.212000
chr20,35437522,T,C,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.523000
chr20,35618703,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.235000
chr20,35938941,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.243000
chr20,36198006,CC,TT,MODERATE,missense_variant,TRUE,0/1,0/0,0.529000
chr20,36209577,CC,TT,HIGH,stop_gained,TRUE,0/1,0/0,0.240000
chr20,36218914,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.214000
chr20,36431755,CC,TT,MODERATE,missense_variant,TRUE,0/1,0/0,0.233000
chr20,36916796,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.495000
chr20,37062160,A,C,MODERATE,missense_variant,TRUE,0/1,0/0,0.549000
chr20,37301344,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.258000
chr20,37521378,G,T,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.510000
chr20,37522711,G,A,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;intron_variant;missense_variant,TRUE,0/1,0/0,0.515000
chr20,37931693,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.227000
chr20,38138323,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.242000
chr20,38748753,G,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.243000
chr20,38767495,C,T,HIGH,stop_gained,TRUE,0/1,0/0,0.455000
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chrX,151671089,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.721000
chrX,151743542,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.694000
chrX,151744472,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.713000
chrX,152255956,C,A,HIGH,stop_gained,TRUE,0/1,0/0,0.713000
chrX,152255959,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.712000
chrX,152652850,G,A,"MODERATE,MODIFIER",intron_variant;missense_variant,TRUE,0/1,0/0,0.702000
chrX,152736793,A,T,"MODERATE,MODIFIER,MODIFIER",intron_variant;missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.712000
chrX,152862669,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.616000
chrX,153057356,G,C,"MODERATE,MODIFIER",missense_variant;upstream_gene_variant,TRUE,0/1,0/0,0.758000
chrX,153553117,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.685000
chrX,153781316,G,A,"MODERATE,MODIFIER,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.699000
chrX,153964127,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.674000
chrX,154154600,C,T,"MODERATE,MODIFIER",downstream_gene_variant;missense_variant,TRUE,0/1,0/0,0.670000
chrX,154534441,C,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.702000
chrX,154792278,G,A,MODERATE,missense_variant,TRUE,0/1,0/0,0.670000
chrX,154904026,G,A,"HIGH,MODIFIER",downstream_gene_variant;stop_gained,TRUE,0/1,0/0,0.697000
chrX,155889498,GG,AA,MODERATE,missense_variant,TRUE,0/1,0/0,0.188000
chrY,5100306,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.689000
chrY,12738247,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.711000
chrY,19709776,C,A,HIGH,stop_gained,TRUE,0/1,0/0,0.638000
chrY,20780950,C,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.663000