succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (1029_BG5-T1-TDNA-1_23FC2GLT4_s29) 3m 31s 1m 53s 50s 48s 1.9 GB 285% 7.6 GB 81.0 MB 7.4 GB 81.1 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (1029_BICA-N1-BDNA-1_2375WFLT3_s32) 9m 5s 1m 31s 3m 34s 4m 0s 1.9 GB 332% 41.6 GB 681.3 MB 41.2 GB 683.3 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (1029_BICA-T1-TDNA-1_23FC2GLT4_s33) 25m 58s 1m 25s 12m 40s 11m 53s 1.9 GB 372% 206.9 GB 1.2 GB 206.4 GB 1.2 GB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 14m 17s 1m 28s 10m 19s 2m 30s 10.2 MB 151% 38.5 GB 164.4 KB 38.5 GB 164.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21) 5m 45s 1m 24s 2m 54s 1m 27s 10.3 MB 160% 11.8 GB 145.2 KB 5.1 GB 148.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BBS1-N1-BDNA-1_2375WFLT3_s23) 14m 20s 1m 27s 9m 17s 3m 36s 11.1 MB 150% 33.9 GB 163.9 KB 33.9 GB 164.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BBS1-T1-TDNA-1_23FC2GLT4_s23) 1h 3m 5s 56m 4s 7m 31s 12.0 MB 137% 206.0 GB 162.7 KB 206.0 GB 164.0 KB 2
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BG5-N1-BDNA-1_2375WFLT3_s29) 16m 5s 2m 1s 11m 22s 2m 42s 10.2 MB 150% 43.8 GB 166.0 KB 43.8 GB 168.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BG5-T1-TDNA-1_23FC2GLT4_s29) 4m 20s 1m 15s 1m 45s 1m 20s 10.1 MB 162% 7.4 GB 148.7 KB 874.4 MB 148.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BICA-N1-BDNA-1_2375WFLT3_s32) 16m 1s 1m 19s 10m 28s 4m 14s 11.4 MB 151% 41.2 GB 164.6 KB 41.2 GB 164.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (1029_BICA-T1-TDNA-1_23FC2GLT4_s33) 1h 1m 6s 53m 29s 7m 32s 12.1 MB 137% 206.3 GB 164.2 KB 206.3 GB 164.0 KB 2
succeeded NFCORE_SAREK:SAREK:MULTIQC 1m 30s 13s 51s 25s 884.9 MB 105% 231.2 MB 200.8 MB 0 bytes 188.1 MB 1
succeeded NFCORE_SAREK:SAREK:TMB (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 9s 7s 1s 0s 13.2 MB 100% 14.7 MB 24.6 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:TMB (1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23) 9s 7s 1s 0s 71.9 MB 102% 17.0 MB 2.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:TMB (1029_BG5-T1-TDNA-1_23FC2GLT4_s29_vs_1029_BG5-N1-BDNA-1_2375WFLT3_s29) 8s 6s 0s 1s 13.1 MB 100% 13.8 MB 3.1 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:TMB (1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32) 13s 9s 1s 2s 71.8 MB 101% 20.0 MB 558.1 KB 0 bytes 568.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;haplotypecaller) 6s 4s - - 18.2 MB 6984% 3.3 MB 1.8 MB 0 bytes 1.8 MB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;manta) 7s 5s - - 16.1 MB 8438% 198.2 KB 35.2 KB 0 bytes 48.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;sentieon_haplotyper) 5s 3s - - 19.0 MB 5943% 3.3 MB 1.8 MB 0 bytes 1.8 MB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;strelka) 7s 5s - - 16.3 MB 7277% 2.0 MB 1.1 MB 0 bytes 1.1 MB 1
1060 items found |
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