NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (1029_BICA-T1-TDNA-1_23FC2GLT4_s33;SNP_GRCh38_hg38_wChr) - mipeters-std-largest2-smallest2-69814f07 - Workflow Tracker

Runs
mipeters-std..t2-69814f07
Tasks
BCFTOOLS_MPILEUP (1029_BICA-T1-TDNA-1_23FC2GLT4_s33;SNP_GRCh38_hg38_wChr)

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Task Info

Status: succeeded
Hash: fe37491d293e
Process: NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP
Tag: 1029_BICA-T1-TDNA-1_23FC2GLT4_s33;SNP_GRCh38_hg38_wChr
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: cc/219fde
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/219fded5be1f692fbf1156b65e8f9a
Native ID: nf-cc219fded5be1f692fbf1156b65e8f9a-93c84

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 577.4 MB / 4.0 GB
Process I/O (rchar / wchar): 212.2 GB / 13.7 MB
Disk I/O (read / write): 212.1 GB / 1.4 MB
Host: i-062c3e599e534f61e ( on-demand)

Runtime

Submitted: Feb 02, 2026 5:43:06 PM
Completed: Feb 02, 2026 6:10:55 PM
Total Duration: 27m 48s

Phases

Queue: 6s
Execution: 20m 4s
Stage/Unstage: 7m 38s

Attempt 1

Execution

Status: failed
Hash: b9/a2d196
Exit Code: 143
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/bcftools:1.20--h8b25389_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/a2d196a2b3b85b02a2f01d9e42e15b
Native ID: nf-b9a2d196a2b3b85b02a2f01d9e42e15b-a412c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 2.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0cd00580aa894f6b6 ( spot)

Runtime

Submitted: Feb 02, 2026 5:29:14 PM
Completed: Feb 02, 2026 5:42:13 PM
Total Duration: 12m 58s

Phases

Queue: 1m 19s
Execution: 11m 39s
Stage/Unstage: 0s