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Filename
1029_0I_segments.tsv
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s3://ai-pipelines-experiment/chnobles/nf-runs/probe-agg-test/tumor_only/segments/1029_0I_segments.tsv
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59.8 KB
Workflow Run
nf-probe-agg-test
Published
Jun 03, 2026 7:14 AM

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seg_id specimen_id chrom start end tumor_sample_id normal_sample_id n_probes n_het_sites cnlr_median cnlr_wmean mean_mbaf median_het_depth mean_valor mafR tcn lcn call clone_subset clone_purity purity clonal_frac n_clones dipLogR z_score residual_lr residual_lor sample_type flowcell sample_id
1 1029_0I chr1 69641 2029644 1029_0I-T1-TDNA-1_A23KCGYLT4_1 833 151 0.6507 0.6634 0.5527 1073.0 0.204 0.0336 5 2 amp 2;4;5;7 0.3694 0.7399 0.4992 7 -0.514 45.55 0.0146 -0.0516 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
2 1029_0I chr1 2029655 2556672 1029_0I-T1-TDNA-1_A23KCGYLT4_1 185 33 0.0011 0.0198 0.6525 450.0 0.5095 1.7037 2 0 cn-loh 3;5;6 0.2872 0.7399 0.3882 7 -0.514 8.25 0.0011 0.0013 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
3 1029_0I chr1 2556607 3512125 1029_0I-T1-TDNA-1_A23KCGYLT4_1 223 83 0.6336 0.6313 0.5231 926.5 0.0923 0.0093 6 3 amp 1;6 0.2757 0.7399 0.3727 7 -0.514 22.82 -0.0001 0.0663 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
4 1029_0I chr1 3514549 57072438 1029_0I-T1-TDNA-1_A23KCGYLT4_1 13639 1747 0.7408 0.7465 0.5331 820.0 0.1297 0.0237 6 3 amp 1;2;7 0.3356 0.7399 0.4535 7 -0.514 208.51 -0.0 0.1047 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
5 1029_0I chr1 57136502 108800356 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5119 632 0.6459 0.5288 0.5329 419.0 0.1308 0.0242 4 2 amp 1;2;4;5;7 0.5637 0.7399 0.7618 7 -0.514 111.37 0.0009 0.0928 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
6 1029_0I chr1 108807380 121324669 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2938 231 0.7427 0.7108 0.5272 775.8 0.1076 0.0152 6 3 amp 1;2;7 0.3356 0.7399 0.4535 7 -0.514 96.94 0.0019 0.0803 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
7 1029_0I chr1 121365260 167918428 1029_0I-T1-TDNA-1_A23KCGYLT4_1 6794 822 0.9761 0.973 0.5902 1059.5 0.3624 0.1432 5 2 amp 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 195.09 -0.0004 0.0094 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
8 1029_0I chr1 167919954 185184384 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2935 348 0.9664 0.9015 0.5966 700.0 0.3851 0.166 5 2 amp 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 127.07 -0.0101 0.0303 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
9 1029_0I chr1 185184728 200045603 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1129 79 0.5365 0.5267 0.5916 349.0 0.3672 0.1493 6 2 amp 4;5 0.2282 0.7399 0.3084 7 -0.514 43.96 -0.0058 0.0119 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
10 1029_0I chr1 200048171 247448545 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8309 1242 0.968 0.938 0.5849 892.0 0.3402 0.1256 5 2 amp 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 214.09 -0.0007 -0.0128 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
11 1029_0I chr1 247451030 248918363 1029_0I-T1-TDNA-1_A23KCGYLT4_1 387 119 0.9568 0.9535 0.6025 2368.0 0.412 0.1706 5 2 amp 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 46.52 -0.0197 0.0686 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
12 1029_0I chr10 47057 3785038 1029_0I-T1-TDNA-1_A23KCGYLT4_1 300 69 0.4245 0.4795 0.6439 539.0 0.587 0.358 5 1 amp 4;6;7 0.2379 0.7399 0.3216 7 -0.514 20.96 -0.0158 0.0192 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
13 1029_0I chr10 4826273 15141520 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1119 195 0.0737 0.0874 0.8206 344.0 1.4967 2.3138 2 0 cn-loh 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 50.36 0.0737 -0.0019 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
14 1029_0I chr10 15141460 62092807 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4315 583 -0.034 -0.0965 0.8184 405.5 1.4799 2.2662 2 0 cn-loh 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 85.97 -0.034 0.0068 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
15 1029_0I chr10 62092747 87863868 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3165 298 0.0261 0.0124 0.8176 404.0 1.4753 2.3042 2 0 cn-loh 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 61.22 0.0261 0.0013 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
16 1029_0I chr10 87863868 87864080 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3 2 -0.0941 -0.1416 0.8324 8495.0 1.6023 2.5664 1 0 del 6;7 0.1208 0.7399 0.1632 7 -0.514 0.39 -0.0042 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
17 1029_0I chr10 87863988 89015862 1029_0I-T1-TDNA-1_A23KCGYLT4_1 308 60 -0.1915 -0.1935 0.8161 399.0 1.4662 2.2413 2 0 cn-loh 1;2;3;4;5 0.6192 0.7399 0.8368 7 -0.514 28.41 -0.1915 0.0029 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
18 1029_0I chr10 89015862 89028222 1029_0I-T1-TDNA-1_A23KCGYLT4_1 71 24 0.2596 0.3632 0.8257 9632.0 1.5534 2.398 3 0 amp 1;2;3;4;7 0.5475 0.7399 0.7399 7 -0.514 19.11 -0.0895 0.0148 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
19 1029_0I chr10 89028222 97679916 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1766 280 0.0023 -0.0452 0.826 324.0 1.5352 2.3981 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 61.38 0.0023 0.0034 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
20 1029_0I chr10 97713881 112432353 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2477 286 0.7179 0.6977 0.5265 773.0 0.1053 0.0163 4 2 amp 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 86.06 -0.0003 0.0774 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
21 1029_0I chr10 112432360 119061364 1029_0I-T1-TDNA-1_A23KCGYLT4_1 961 113 0.0295 -0.0225 0.8165 313.0 1.4384 2.3902 2 0 cn-loh 1;2;3;4;5 0.6192 0.7399 0.8368 7 -0.514 37.37 0.0295 0.0004 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
22 1029_0I chr10 119065374 133626762 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2287 398 0.7306 0.7539 0.5363 824.0 0.1416 0.0291 6 3 amp 2;4;5 0.33 0.7399 0.446 7 -0.514 84.29 -0.0006 0.1177 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
23 1029_0I chr11 193064 14483182 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4061 942 0.9187 0.9134 0.59 1312.0 0.3594 0.1402 5 2 amp 1;3;4;5;6 0.5987 0.7399 0.8091 7 -0.514 143.19 -0.0058 0.0238 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
24 1029_0I chr11 14486345 16234715 1029_0I-T1-TDNA-1_A23KCGYLT4_1 154 16 0.1719 0.2223 0.7314 300.0 0.8851 0.7068 3 0 amp 1;5;7 0.3447 0.7399 0.4658 7 -0.514 10.59 -0.0575 0.0086 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
25 1029_0I chr11 16318441 57426207 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4183 597 0.7179 0.6748 0.5486 808.5 0.1917 0.051 5 2 amp 1;3;6;7 0.4099 0.7399 0.554 7 -0.514 112.19 0.0265 -0.0883 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
26 1029_0I chr11 57460806 102864283 1029_0I-T1-TDNA-1_A23KCGYLT4_1 9216 921 -0.0501 -0.0715 0.8255 472.0 1.5318 2.4032 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 112.22 -0.0501 0.0075 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
27 1029_0I chr11 102865769 107650985 1029_0I-T1-TDNA-1_A23KCGYLT4_1 463 43 -0.3738 -0.462 0.8305 301.5 1.5452 2.4487 1 0 del 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 31.25 0.2927 0.1963 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
28 1029_0I chr11 107654136 134387716 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5066 597 0.0027 0.0171 0.8253 416.0 1.5278 2.3701 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 89.65 0.0027 0.0037 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
29 1029_0I chr12 66830 3829000 1029_0I-T1-TDNA-1_A23KCGYLT4_1 843 99 0.9987 1.045 0.5761 748.0 0.3052 0.1038 5 2 amp 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 70.11 0.0075 -0.0568 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
30 1029_0I chr12 3828940 4302367 1029_0I-T1-TDNA-1_A23KCGYLT4_1 53 2 0.4527 0.4147 0.6014 214.5 0.4025 0.1916 4 0 amp 2;4;5;7 0.3694 0.7399 0.4992 7 -0.514 7.93 -0.0008 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
31 1029_0I chr12 4302367 4369025 1029_0I-T1-TDNA-1_A23KCGYLT4_1 41 9 0.6123 0.592 0.8755 5911.0 1.944 3.7903 4 0 amp 1;2;3;4;6 0.5896 0.7399 0.7968 7 -0.514 16.97 -0.0563 0.0312 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
32 1029_0I chr12 4369025 8138301 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1421 180 0.401 0.3909 0.8683 627.0 1.8596 3.5612 3 0 amp 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 70.43 -0.0023 -0.0106 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
33 1029_0I chr12 8172558 8177574 1029_0I-T1-TDNA-1_A23KCGYLT4_1 12 8 -0.632 -0.8614 0.8833 1298.0 2.006 4.0266 2 0 cn-loh 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 14.7 -0.632 0.1012 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
34 1029_0I chr12 8221821 11699588 1029_0I-T1-TDNA-1_A23KCGYLT4_1 681 184 0.2839 0.2006 0.8191 533.5 1.3593 3.098 3 0 amp 1;3;4;6;7 0.5271 0.7399 0.7123 7 -0.514 51.7 -0.0536 0.0071 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
35 1029_0I chr12 11717732 11753158 1029_0I-T1-TDNA-1_A23KCGYLT4_1 12 5 0.4853 0.5896 0.8726 7404.0 1.9233 3.6981 3 0 amp 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 11.14 0.0747 0.0001 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
36 1029_0I chr12 11753158 11789398 1029_0I-T1-TDNA-1_A23KCGYLT4_1 268 2 0.4057 0.3952 0.8159 6827.0 1.3974 1.0978 5 0 amp 3;6;7 0.2156 0.7399 0.2914 7 -0.514 15.99 0.0015 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
37 1029_0I chr12 11789398 11789878 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4 2 0.3307 0.4461 0.8561 14585.5 1.7825 3.1774 4 0 amp 2;4;7 0.2584 0.7399 0.3492 7 -0.514 1.59 -0.0009 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
38 1029_0I chr12 11789878 15895529 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1246 74 0.4774 0.4445 0.8709 392.0 1.8915 3.6113 3 0 amp 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 56.25 0.0741 0.0039 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
39 1029_0I chr12 15897849 22684615 1029_0I-T1-TDNA-1_A23KCGYLT4_1 869 127 -0.0788 -0.0943 0.8626 312.0 1.8145 3.3289 2 0 cn-loh 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 49.27 -0.0788 0.055 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
40 1029_0I chr12 23534163 25205479 1029_0I-T1-TDNA-1_A23KCGYLT4_1 173 27 0.5042 0.4086 0.8625 326.2 1.8151 3.3435 3 0 amp 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 27.65 0.1097 -0.0138 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
41 1029_0I chr12 25205959 25236167 1029_0I-T1-TDNA-1_A23KCGYLT4_1 79 20 0.5755 0.5861 0.8572 4728.5 1.7875 3.1977 4 0 amp 1;2;3;4;7 0.5475 0.7399 0.7399 7 -0.514 22.9 -0.0544 0.0159 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
42 1029_0I chr12 25240025 27297830 1029_0I-T1-TDNA-1_A23KCGYLT4_1 264 36 0.275 0.1725 0.8639 233.0 1.7857 3.3148 3 0 amp 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 28.25 -0.1161 0.0118 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
43 1029_0I chr12 27297770 32216353 1029_0I-T1-TDNA-1_A23KCGYLT4_1 592 115 0.9513 0.8402 0.6015 709.8 0.4077 0.1793 5 2 amp 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 56.59 -0.0174 0.0528 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
44 1029_0I chr12 32216351 38905589 1029_0I-T1-TDNA-1_A23KCGYLT4_1 238 22 0.4867 0.454 0.7498 272.0 0.9519 1.828 5 0 amp 4;5;7 0.2675 0.7399 0.3616 7 -0.514 21.65 -0.0001 0.0102 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
45 1029_0I chr12 39294404 40466083 1029_0I-T1-TDNA-1_A23KCGYLT4_1 378 68 -0.2664 -0.2412 0.8796 203.0 1.9337 3.8101 2 0 cn-loh 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 40.59 -0.2664 0.0319 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
46 1029_0I chr12 40473085 47985834 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1087 118 0.323 0.2402 0.8134 272.0 1.3671 2.5169 3 0 amp 1;2;3;6;7 0.5118 0.7399 0.6916 7 -0.514 45.42 -0.0057 0.002 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
47 1029_0I chr12 47985877 47986928 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7 5 0.1396 0.1535 0.8689 4372.5 1.8841 3.5689 2 0 cn-loh 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 10.22 0.1396 -0.0215 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
48 1029_0I chr12 47987067 71586359 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7111 602 0.3722 0.3706 0.8686 726.5 1.8637 3.6394 3 0 amp 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 133.91 -0.0311 -0.0057 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
49 1029_0I chr12 71610983 76422672 1029_0I-T1-TDNA-1_A23KCGYLT4_1 388 26 -0.0416 -0.0648 0.87 168.2 1.8099 3.56 2 0 cn-loh 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 22.82 -0.0416 -0.0613 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
50 1029_0I chr12 76450890 78185740 1029_0I-T1-TDNA-1_A23KCGYLT4_1 153 23 0.4018 0.3946 0.6929 341.8 0.6536 0.9969 6 0 amp 4;7 0.1565 0.7399 0.2115 7 -0.514 14.94 0.0089 0.0223 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
51 1029_0I chr12 78188207 88532555 1029_0I-T1-TDNA-1_A23KCGYLT4_1 810 50 -0.249 -0.209 0.8718 212.0 1.8662 3.5612 2 0 cn-loh 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 36.19 -0.249 -0.0386 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
52 1029_0I chr12 88545715 101614569 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1496 143 0.3912 0.3047 0.8614 285.0 1.7987 3.2766 3 0 amp 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 63.15 0.0001 -0.0042 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
53 1029_0I chr12 101617142 108210359 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1100 172 0.0195 -0.022 0.8283 289.0 1.5433 2.4601 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 48.56 0.0195 -0.0072 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
54 1029_0I chr12 108224682 119876180 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2520 239 0.7508 0.774 0.5219 643.0 0.083 0.0116 6 3 amp 2;4;6;7 0.3398 0.7399 0.4592 7 -0.514 90.74 0.0027 0.0562 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
55 1029_0I chr12 119989976 122490604 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1139 124 -0.0008 0.0103 0.8246 484.0 1.523 2.4862 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 40.8 -0.0008 0.0017 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
56 1029_0I chr12 122492660 123162252 1029_0I-T1-TDNA-1_A23KCGYLT4_1 353 33 0.5956 0.5789 0.6111 498.5 0.406 0.1322 6 2 amp 4;5;7 0.2675 0.7399 0.3616 7 -0.514 27.55 -0.0227 0.064 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
57 1029_0I chr12 123162986 123734015 1029_0I-T1-TDNA-1_A23KCGYLT4_1 258 72 0.9786 0.9731 0.5478 487.7 0.186 0.0387 6 3 amp 1;3;4;6 0.4877 0.7399 0.6591 7 -0.514 37.97 -0.0035 0.1557 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
58 1029_0I chr12 123735517 125654769 1029_0I-T1-TDNA-1_A23KCGYLT4_1 417 80 0.019 0.0589 0.8313 528.5 1.5716 2.5004 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 33.84 0.019 -0.0202 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
59 1029_0I chr12 128267352 132859275 1029_0I-T1-TDNA-1_A23KCGYLT4_1 902 187 0.6892 0.697 0.5209 1242.0 0.0826 0.0104 6 3 amp 1;5 0.3053 0.7399 0.4126 7 -0.514 49.86 0.0015 0.061 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
60 1029_0I chr12 132861435 133234376 1029_0I-T1-TDNA-1_A23KCGYLT4_1 107 14 0.0016 -0.0638 0.8279 410.0 1.5228 2.274 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 13.89 0.0016 -0.0025 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
61 1029_0I chr13 19173833 20439754 1029_0I-T1-TDNA-1_A23KCGYLT4_1 196 40 1.0076 0.9907 0.5818 666.0 0.3285 0.1202 5 2 amp 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 34.26 0.0164 -0.0351 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
62 1029_0I chr13 20489313 21510159 1029_0I-T1-TDNA-1_A23KCGYLT4_1 254 19 0.203 0.204 0.7021 418.0 0.8481 0.7775 3 0 amp 1;2 0.2962 0.7399 0.4003 7 -0.514 11.64 0.0038 0.0018 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
63 1029_0I chr13 21514304 32522316 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1786 182 0.9647 0.9394 0.575 686.5 0.2998 0.0998 5 2 amp 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 98.53 0.013 -0.053 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
64 1029_0I chr13 32527407 32758615 1029_0I-T1-TDNA-1_A23KCGYLT4_1 59 5 0.2384 0.0504 0.7264 216.0 0.9424 0.9361 3 0 amp 1;2;7 0.3356 0.7399 0.4535 7 -0.514 6.66 0.0146 -0.0001 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
65 1029_0I chr13 32759577 98015684 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3908 407 0.9059 0.813 0.5783 509.0 0.3127 0.1093 5 2 amp 1;2;3;5;6 0.5834 0.7399 0.7885 7 -0.514 137.0 -0.0011 -0.0333 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
66 1029_0I chr13 98016670 114326203 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1993 301 0.968 0.9328 0.5737 777.0 0.2901 0.0945 5 2 amp 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 104.62 0.0163 -0.0565 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
67 1029_0I chr14 18601119 20354275 1029_0I-T1-TDNA-1_A23KCGYLT4_1 148 61 0.02 0.0051 0.8028 726.5 1.3666 2.0844 2 0 cn-loh 1;3;4;5;6 0.5987 0.7399 0.8091 7 -0.514 26.03 0.02 -0.008 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
68 1029_0I chr14 20354166 20356702 1029_0I-T1-TDNA-1_A23KCGYLT4_1 15 8 -0.0527 -0.0277 0.8298 4427.5 1.5808 2.5048 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 10.79 -0.0527 -0.0082 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
69 1029_0I chr14 20357038 24506630 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1891 271 -0.0777 -0.0586 0.8344 616.5 1.5995 2.5917 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 63.77 -0.0777 0.0046 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
70 1029_0I chr14 24507342 35401848 1029_0I-T1-TDNA-1_A23KCGYLT4_1 673 45 0.0256 -0.0761 0.8356 224.0 1.5982 2.5742 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 25.62 0.0256 -0.0079 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
71 1029_0I chr14 35401848 35409869 1029_0I-T1-TDNA-1_A23KCGYLT4_1 51 19 -0.1268 -0.1275 0.8056 10611.0 1.3928 2.3869 2 0 cn-loh 1;2;4;5;6 0.6058 0.7399 0.8187 7 -0.514 15.1 -0.1268 0.0095 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
72 1029_0I chr14 35534199 63991128 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2803 232 -0.0627 -0.1477 0.8219 256.5 1.4973 2.3642 2 0 cn-loh 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 55.21 -0.0627 0.0002 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
73 1029_0I chr14 63993778 64441478 1029_0I-T1-TDNA-1_A23KCGYLT4_1 259 9 0.1481 0.1834 0.8419 406.0 1.6514 2.7621 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 13.19 0.1481 0.0524 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
74 1029_0I chr14 64442049 65669517 1029_0I-T1-TDNA-1_A23KCGYLT4_1 268 67 -0.0896 -0.0675 0.8245 639.0 1.5372 2.3641 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 30.28 -0.0896 0.0057 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
75 1029_0I chr14 65721728 104173268 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5655 669 -0.0099 -0.0171 0.8273 356.5 1.5476 2.4428 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 95.59 -0.0099 -0.0095 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
76 1029_0I chr14 104173293 104770856 1029_0I-T1-TDNA-1_A23KCGYLT4_1 114 37 -0.1608 -0.1782 0.8222 457.0 1.5117 2.3176 2 0 cn-loh 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 22.41 -0.1608 0.0147 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
77 1029_0I chr14 104772149 104792663 1029_0I-T1-TDNA-1_A23KCGYLT4_1 44 17 -0.1177 -0.1657 0.8352 3434.5 1.6169 2.6275 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 16.19 -0.1177 0.0289 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
78 1029_0I chr14 104792565 105709503 1029_0I-T1-TDNA-1_A23KCGYLT4_1 503 103 -0.2216 -0.2041 0.7117 694.0 0.8196 1.7224 2 0 cn-loh 2;4;5;6 0.4115 0.7399 0.5561 7 -0.514 24.59 -0.2216 -0.0014 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
79 1029_0I chr14 105709478 105852033 1029_0I-T1-TDNA-1_A23KCGYLT4_1 164 67 -0.4233 -0.407 0.7852 9505.5 1.2416 2.3173 1 0 del 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 28.7 0.1988 0.0821 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
80 1029_0I chr14 105855910 105904787 1029_0I-T1-TDNA-1_A23KCGYLT4_1 134 2 -0.1487 -0.0756 0.8133 747.0 1.4684 2.1479 1 0 del 2;3 0.1967 0.7399 0.2658 7 -0.514 4.14 0.0006 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
81 1029_0I chr14 105914496 105916570 1029_0I-T1-TDNA-1_A23KCGYLT4_1 11 0 -2.6259 -2.619 0 0 del 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 20.96 -0.6828 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
82 1029_0I chr14 105916771 106269461 1029_0I-T1-TDNA-1_A23KCGYLT4_1 74 30 0.0598 -0.0558 0.8211 3014.0 1.5074 2.4071 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 20.08 0.0598 -0.0006 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
83 1029_0I chr14 106269401 106578915 1029_0I-T1-TDNA-1_A23KCGYLT4_1 76 10 0.091 0.1417 0.7095 2175.0 0.8242 1.8796 2 0 cn-loh 2;4;5;6 0.4115 0.7399 0.5561 7 -0.514 6.98 0.091 0.0011 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
84 1029_0I chr14 106578980 106771708 1029_0I-T1-TDNA-1_A23KCGYLT4_1 37 25 0.0572 0.0519 0.7638 4175.5 1.1076 1.7273 2 0 cn-loh 1;2;4;5 0.5244 0.7399 0.7086 7 -0.514 14.1 0.0572 -0.0034 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
85 1029_0I chr14 106771648 106874851 1029_0I-T1-TDNA-1_A23KCGYLT4_1 25 1 0.0537 0.0444 0.8316 1033.0 1.5944 4 0 amp 7 0.0394 0.7399 0.0532 7 -0.514 0.65 -0.002 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
86 1029_0I chr15 20535569 34104280 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1547 198 0.7401 0.718 0.5532 746.3 0.1756 0.0347 5 2 amp 1;2;3;7 0.4304 0.7399 0.5816 7 -0.514 70.35 0.0215 -0.0786 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
87 1029_0I chr15 34142257 34346294 1029_0I-T1-TDNA-1_A23KCGYLT4_1 91 17 0.0599 0.0849 0.8184 368.0 1.4837 2.2426 2 0 cn-loh 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 14.7 0.0599 0.0048 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
88 1029_0I chr15 34346294 34347134 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4 6 0.1934 0.2617 0.8186 2304.8 1.503 2.311 3 0 amp 1;2;4;5 0.5244 0.7399 0.7086 7 -0.514 8.9 -0.1425 0.03 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
89 1029_0I chr15 34347854 34348814 1029_0I-T1-TDNA-1_A23KCGYLT4_1 14 0 -0.1256 -0.1928 0 0 del 6 0.0814 0.7399 0.11 7 -0.514 1.13 -0.0031 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
90 1029_0I chr15 34348814 34349414 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5 1 -0.036 -0.0857 0.8321 12133.0 1.6005 1 0 del 7 0.0394 0.7399 0.0532 7 -0.514 0.19 -0.0073 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
91 1029_0I chr15 34349414 34350134 1029_0I-T1-TDNA-1_A23KCGYLT4_1 6 3 -0.2343 -0.2674 0.836 12486.0 1.6281 2.6514 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 6.95 -0.2343 0.0412 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
92 1029_0I chr15 34350134 41079923 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1095 109 -0.0358 -0.0338 0.7721 527.0 1.1332 2.0468 2 0 cn-loh 1;2;4;6;7 0.5341 0.7399 0.7219 7 -0.514 30.14 -0.0358 -0.0064 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
93 1029_0I chr15 41080965 101819015 1029_0I-T1-TDNA-1_A23KCGYLT4_1 13315 1470 0.6545 0.6315 0.5219 657.5 0.0869 0.014 6 3 amp 3;5;6 0.2872 0.7399 0.3882 7 -0.514 181.85 -0.0004 0.0565 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
94 1029_0I chr16 47432 3356676 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2544 446 0.5989 0.5992 0.5456 899.0 0.177 0.0319 5 2 amp 1;3;7 0.3285 0.7399 0.4439 7 -0.514 73.15 0.0209 -0.0647 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
95 1029_0I chr16 3356697 90075935 1029_0I-T1-TDNA-1_A23KCGYLT4_1 14529 2050 0.7211 0.7308 0.5257 835.0 0.1014 0.0143 6 3 amp 3;4;5 0.323 0.7399 0.4365 7 -0.514 209.37 0.0022 0.0753 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
96 1029_0I chr17 137555 18388294 1029_0I-T1-TDNA-1_A23KCGYLT4_1 6373 1014 -0.008 0.0038 0.8274 563.0 1.547 2.4863 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 118.4 -0.008 -0.0002 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
97 1029_0I chr17 18491903 29684703 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1501 247 0.5893 0.6031 0.5785 846.0 0.3112 0.115 6 2 amp 3;5;7 0.2452 0.7399 0.3313 7 -0.514 56.05 0.0136 -0.0429 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
98 1029_0I chr17 29695434 52157833 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8603 758 0.0037 0.0116 0.8232 549.5 1.5031 2.474 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 100.39 0.0037 -0.0057 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
99 1029_0I chr17 52986422 83094575 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7643 1045 0.7239 0.7275 0.528 830.0 0.1045 0.0147 6 3 amp 3;5;6;7 0.3266 0.7399 0.4414 7 -0.514 152.47 -0.0014 0.0844 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
100 1029_0I chr18 47389 80247372 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7001 995 0.7235 0.6622 0.5287 566.0 0.1141 0.0207 6 3 amp 3;5;6;7 0.3266 0.7399 0.4414 7 -0.514 145.84 -0.0018 0.0814 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
101 1029_0I chr19 110681 24126685 1029_0I-T1-TDNA-1_A23KCGYLT4_1 11332 1847 0.2251 0.2261 0.5374 601.5 0.1484 0.0295 5 2 amp 4 0.1171 0.7399 0.1583 7 -0.514 58.96 -0.0084 0.0176 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
102 1029_0I chr19 29207556 54242117 1029_0I-T1-TDNA-1_A23KCGYLT4_1 9647 1153 0.656 0.6509 0.608 868.2 0.4344 0.2079 6 2 amp 1;2 0.2962 0.7399 0.4003 7 -0.514 158.74 -0.0152 0.0354 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
103 1029_0I chr19 54250782 58571441 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2042 415 -0.3244 -0.3153 0.7723 450.0 1.1818 1.6562 1 0 del 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 68.28 0.2518 0.1093 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
104 1029_0I chr2 41522 90221450 1029_0I-T1-TDNA-1_A23KCGYLT4_1 12122 1415 0.7595 0.7375 0.5291 666.0 0.1154 0.0192 6 3 amp 2;3;5;7 0.3471 0.7399 0.469 7 -0.514 201.42 -0.001 0.0856 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
105 1029_0I chr2 94871525 113201423 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3680 428 0.4296 0.3919 0.6332 658.8 0.5364 0.3085 5 1 amp 4;5 0.2282 0.7399 0.3084 7 -0.514 67.83 0.0049 -0.0066 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
106 1029_0I chr2 113215987 113239747 1029_0I-T1-TDNA-1_A23KCGYLT4_1 185 46 0.0723 0.1043 0.6346 17082.5 0.5513 0.3067 3 0 amp 5;6 0.1924 0.7399 0.2601 7 -0.514 9.28 -0.0602 0.0065 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
107 1029_0I chr2 113239747 115836783 1029_0I-T1-TDNA-1_A23KCGYLT4_1 172 21 -0.1084 -0.103 0.6271 273.0 0.511 0.3053 2 0 cn-loh 5;6;7 0.2318 0.7399 0.3133 7 -0.514 6.26 -0.1084 -0.0007 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
108 1029_0I chr2 115840696 161204837 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4125 462 0.3874 0.3027 0.6325 525.0 0.5347 0.3034 5 1 amp 2;5 0.2129 0.7399 0.2877 7 -0.514 65.48 -0.0124 0.0143 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
109 1029_0I chr2 161223863 167245406 1029_0I-T1-TDNA-1_A23KCGYLT4_1 853 78 0.0768 0.0639 0.6358 270.0 0.5499 0.3319 3 0 amp 3;6 0.1762 0.7399 0.2382 7 -0.514 12.15 -0.045 0.0128 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
110 1029_0I chr2 167247057 178636854 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2277 246 0.4709 0.3718 0.6222 550.5 0.4962 0.26 4 1 amp 1;2;7 0.3356 0.7399 0.4535 7 -0.514 56.9 0.0535 -0.0486 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
111 1029_0I chr2 178637304 178689943 1029_0I-T1-TDNA-1_A23KCGYLT4_1 150 4 -0.3235 -0.3986 0.6147 355.0 0.4656 0.2048 1 0 del 3;4;5;7 0.3623 0.7399 0.4897 7 -0.514 9.76 -0.0351 -0.0252 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
112 1029_0I chr2 178691985 197401583 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2281 237 0.2737 0.194 0.6219 341.5 0.4919 0.267 6 0 amp 3 0.0948 0.7399 0.1281 7 -0.514 35.74 0.0232 -0.0331 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
113 1029_0I chr2 197401938 241873273 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7855 1029 0.4067 0.3839 0.6256 617.0 0.5098 0.2779 4 1 amp 2;3;6;7 0.3175 0.7399 0.429 7 -0.514 94.49 0.0089 -0.0103 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
114 1029_0I chr20 87677 64273595 1029_0I-T1-TDNA-1_A23KCGYLT4_1 10247 1535 0.7365 0.7429 0.5258 753.0 0.1026 0.0152 6 3 amp 3;4;6;7 0.3327 0.7399 0.4497 7 -0.514 179.58 0.0006 0.0742 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
115 1029_0I chr21 5117108 10603697 1029_0I-T1-TDNA-1_A23KCGYLT4_1 123 18 0.1937 0.2138 0.6764 1064.0 0.6953 0.6639 3 0 amp 2;4;7 0.2584 0.7399 0.3492 7 -0.514 8.97 0.0184 -0.0027 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
116 1029_0I chr21 10605401 29072000 1029_0I-T1-TDNA-1_A23KCGYLT4_1 616 88 -0.0854 -0.2075 0.8168 266.0 1.4642 2.2008 2 0 cn-loh 1;2;3;4;5 0.6192 0.7399 0.8368 7 -0.514 33.27 -0.0854 -0.0014 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
117 1029_0I chr21 29071940 41496172 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2063 295 0.0947 0.0822 0.8319 366.0 1.5746 2.527 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 65.67 0.0947 -0.0229 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
118 1029_0I chr21 41496172 41498692 1029_0I-T1-TDNA-1_A23KCGYLT4_1 16 4 -0.32 -0.2306 0.8393 14977.5 1.6524 2.7305 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 8.56 -0.32 0.0661 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
119 1029_0I chr21 41498692 41507452 1029_0I-T1-TDNA-1_A23KCGYLT4_1 70 2 -0.2438 -0.2108 0.8254 17400.0 1.5523 2.4116 1 0 del 1;4 0.3115 0.7399 0.4209 7 -0.514 4.91 0.0004 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
120 1029_0I chr21 41507452 41530276 1029_0I-T1-TDNA-1_A23KCGYLT4_1 35 17 -0.2986 -0.3928 0.8442 8904.0 1.6851 2.8535 2 0 cn-loh 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 17.33 -0.2986 -0.0555 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
121 1029_0I chr21 41530931 46004008 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1293 298 0.0059 0.0105 0.821 517.5 1.4951 2.3921 2 0 cn-loh 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 62.27 0.0059 0.0088 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
122 1029_0I chr21 46111426 46664423 1029_0I-T1-TDNA-1_A23KCGYLT4_1 386 144 0.9119 0.9623 0.5678 999.0 0.2716 0.0838 5 2 amp 1;2;3;5;6 0.5834 0.7399 0.7885 7 -0.514 43.72 0.0049 -0.0661 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
123 1029_0I chr22 15528158 22893441 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1974 323 0.7166 0.7232 0.5332 1053.0 0.1307 0.0238 4 2 amp 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 76.78 -0.0016 0.1084 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
124 1029_0I chr22 22893381 23838458 1029_0I-T1-TDNA-1_A23KCGYLT4_1 652 80 0.4369 0.4823 0.5301 16703.5 0.1171 0.0068 5 2 amp 2;6;7 0.2227 0.7399 0.3009 7 -0.514 26.97 0.0211 -0.0529 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
125 1029_0I chr22 23838540 50782316 1029_0I-T1-TDNA-1_A23KCGYLT4_1 6744 1036 0.7275 0.7466 0.5262 868.0 0.1035 0.0144 6 3 amp 1;3;7 0.3285 0.7399 0.4439 7 -0.514 143.93 -0.001 0.0778 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
126 1029_0I chr3 319726 2883239 1029_0I-T1-TDNA-1_A23KCGYLT4_1 103 14 0.2183 0.1935 0.5437 319.3 0.1733 0.0359 6 2 amp 6 0.0814 0.7399 0.11 7 -0.514 5.46 0.0006 -0.0097 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
127 1029_0I chr3 2887020 12662619 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2062 147 0.8082 0.8294 0.5246 1186.0 0.098 0.0149 6 3 amp 1;2;6 0.3776 0.7399 0.5103 7 -0.514 88.36 -0.0035 0.0753 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
128 1029_0I chr3 12662619 72998199 1029_0I-T1-TDNA-1_A23KCGYLT4_1 10641 1155 0.7114 0.7079 0.5288 693.2 0.1144 0.0187 4 2 amp 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 176.77 -0.0006 0.085 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
129 1029_0I chr3 73047171 74521186 1029_0I-T1-TDNA-1_A23KCGYLT4_1 103 13 0.6306 0.6136 0.5298 644.0 0.1187 0.0192 4 2 amp 1;2;3;4;7 0.5475 0.7399 0.7399 7 -0.514 15.42 0.0007 0.0879 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
130 1029_0I chr3 75664359 75665254 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5 29 0.7762 0.6656 0.6402 2769.0 0.5678 0.3407 6 2 amp 1;5;6 0.3868 0.7399 0.5227 7 -0.514 8.43 -0.0504 0.1178 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
131 1029_0I chr3 75665535 75737227 1029_0I-T1-TDNA-1_A23KCGYLT4_1 10 26 0.5433 0.5895 0.5674 2438.1 0.2675 0.075 5 2 amp 2;3;4 0.3138 0.7399 0.4241 7 -0.514 5.2 -0.0132 0.0409 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
132 1029_0I chr3 75737236 98087990 1029_0I-T1-TDNA-1_A23KCGYLT4_1 622 75 0.5682 0.4222 0.5267 567.5 0.1063 0.0167 4 2 amp 1;3;5;6 0.4816 0.7399 0.6508 7 -0.514 34.14 0.0011 0.0734 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
133 1029_0I chr3 98132706 98283887 1029_0I-T1-TDNA-1_A23KCGYLT4_1 36 7 -0.5963 -0.6382 0.5337 719.5 0.1344 0.0208 0 0 del 2;4;6;7 0.3398 0.7399 0.4592 7 -0.514 8.64 0.0028 0.1053 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
134 1029_0I chr3 98353856 156706807 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8105 946 0.7052 0.6404 0.5288 572.5 0.1139 0.0189 6 3 amp 1;6;7 0.3151 0.7399 0.4259 7 -0.514 152.93 0.0001 0.082 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
135 1029_0I chr3 156829290 161247383 1029_0I-T1-TDNA-1_A23KCGYLT4_1 449 68 0.5817 0.5098 0.534 518.0 0.1353 0.0225 4 2 amp 1;2;4;6 0.4948 0.7399 0.6687 7 -0.514 29.74 0.0018 0.1012 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
136 1029_0I chr3 161249422 167792709 1029_0I-T1-TDNA-1_A23KCGYLT4_1 268 27 0.0515 0.0095 0.5462 162.8 0.182 0.0461 3 0 amp 7 0.0394 0.7399 0.0532 7 -0.514 2.55 0.0234 0.0069 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
137 1029_0I chr3 167792677 172760299 1029_0I-T1-TDNA-1_A23KCGYLT4_1 606 63 0.7467 0.699 0.5281 494.0 0.112 0.0162 6 3 amp 2;4;6;7 0.3398 0.7399 0.4592 7 -0.514 44.27 -0.0014 0.0766 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
138 1029_0I chr3 172761568 182918123 1029_0I-T1-TDNA-1_A23KCGYLT4_1 699 50 0.4909 0.4271 0.519 527.0 0.0753 0.0095 4 2 amp 3;4;5;6 0.4044 0.7399 0.5465 7 -0.514 31.25 0.001 0.0413 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
139 1029_0I chr3 182938024 198169878 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3228 407 0.7688 0.7681 0.5299 775.8 0.1184 0.0216 6 3 amp 1;4;7 0.3508 0.7399 0.4741 7 -0.514 105.23 0.0019 0.0911 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
140 1029_0I chr4 53399 41742340 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4593 737 0.4199 0.3995 0.6227 534.0 0.4966 0.2621 4 1 amp 1;6;7 0.3151 0.7399 0.4259 7 -0.514 75.06 0.0247 -0.0222 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
141 1029_0I chr4 41743266 148154960 1029_0I-T1-TDNA-1_A23KCGYLT4_1 9859 1141 0.3514 0.2352 0.6198 342.0 0.4832 0.2568 3 1 amp 1;3;4;5;7 0.5566 0.7399 0.7523 7 -0.514 91.56 -0.0029 0.003 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
142 1029_0I chr4 148194714 184010652 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2519 285 -0.0795 -0.1984 0.8246 246.5 1.5237 2.3678 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 62.01 -0.0795 -0.0128 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
143 1029_0I chr4 184010655 184385884 1029_0I-T1-TDNA-1_A23KCGYLT4_1 24 7 -0.0676 -0.0332 0.8505 776.0 1.7211 2.9877 2 0 cn-loh 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 11.0 -0.0676 -0.027 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
144 1029_0I chr4 184385884 184387324 1029_0I-T1-TDNA-1_A23KCGYLT4_1 12 3 -0.1764 -0.2298 0.8357 16462.0 1.6256 2.6435 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 6.96 -0.1764 0.04 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
145 1029_0I chr4 184387324 184429084 1029_0I-T1-TDNA-1_A23KCGYLT4_1 37 3 0.2557 0.1778 0.8081 1675.0 1.4342 2.0572 3 0 amp 2;3;4;5;6 0.5063 0.7399 0.6842 7 -0.514 7.03 -0.0698 0.0131 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
146 1029_0I chr4 184447674 184474194 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8 6 -0.0804 -0.0546 0.8198 6793.0 1.5122 2.2934 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 8.95 -0.0804 -0.0045 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
147 1029_0I chr4 184474345 190174838 1029_0I-T1-TDNA-1_A23KCGYLT4_1 715 130 0.1419 0.1264 0.8182 398.0 1.4742 2.3215 2 0 cn-loh 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 41.49 0.1419 0.0051 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
148 1029_0I chr5 113220 218446 1029_0I-T1-TDNA-1_A23KCGYLT4_1 71 22 -0.0817 0.0165 0.8368 373.5 1.6198 2.6479 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 18.19 -0.0817 0.0129 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
149 1029_0I chr5 220271 353939 1029_0I-T1-TDNA-1_A23KCGYLT4_1 75 76 0.1468 0.2776 0.8498 2642.0 1.7212 2.974 2 0 cn-loh 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 36.42 0.1468 -0.0194 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
150 1029_0I chr5 376602 1295696 1029_0I-T1-TDNA-1_A23KCGYLT4_1 361 64 -0.0834 -0.076 0.8317 428.5 1.5781 2.492 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 30.48 -0.0834 -0.0212 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
151 1029_0I chr5 1295696 35857048 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1939 333 0.421 0.3682 0.6326 491.0 0.538 0.3137 5 1 amp 2;6;7 0.2227 0.7399 0.3009 7 -0.514 49.95 0.0052 -0.0042 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
152 1029_0I chr5 35856975 36049469 1029_0I-T1-TDNA-1_A23KCGYLT4_1 92 30 0.5039 0.4527 0.6241 2407.8 0.5061 0.2582 4 1 amp 3;4;5;7 0.3623 0.7399 0.4897 7 -0.514 13.33 0.0578 -0.0543 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
153 1029_0I chr5 36051829 36257594 1029_0I-T1-TDNA-1_A23KCGYLT4_1 92 8 -0.2487 -0.2776 0.6088 463.0 0.4355 0.2044 1 0 del 1;3;7 0.3285 0.7399 0.4439 7 -0.514 6.38 0.0101 0.007 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
154 1029_0I chr5 36260732 81394163 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5061 592 0.3728 0.2827 0.6306 377.5 0.529 0.3032 5 1 amp 3;5 0.2058 0.7399 0.2781 7 -0.514 70.16 -0.0154 0.0129 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
155 1029_0I chr5 81420443 111098839 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1773 235 0.1487 0.0725 0.6288 292.0 0.5188 0.3002 3 0 amp 3;6 0.1762 0.7399 0.2382 7 -0.514 23.36 0.0269 -0.0154 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
156 1029_0I chr5 111100558 111123954 1029_0I-T1-TDNA-1_A23KCGYLT4_1 25 7 -0.8463 -0.8842 0.6041 135.0 0.41 0.2101 0 0 del 3;4;5;6;7 0.4438 0.7399 0.5997 7 -0.514 10.43 -0.0001 0.3539 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
157 1029_0I chr5 111125591 113385268 1029_0I-T1-TDNA-1_A23KCGYLT4_1 366 74 0.4245 0.4272 0.6252 791.0 0.509 0.2667 5 1 amp 3;6;7 0.2156 0.7399 0.2914 7 -0.514 21.99 0.0203 -0.0155 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
158 1029_0I chr5 113433732 131954392 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1439 155 0.2769 0.1365 0.65 366.5 0.611 0.4035 5 0 amp 3;7 0.1342 0.7399 0.1813 7 -0.514 30.71 0.0124 0.0037 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
159 1029_0I chr5 131959492 176887328 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7166 713 0.3812 0.3789 0.6373 586.3 0.5601 0.3299 5 1 amp 2;4 0.219 0.7399 0.296 7 -0.514 84.93 -0.0286 0.0257 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
160 1029_0I chr5 176887436 181260807 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1465 226 0.3596 0.3585 0.645 734.0 0.594 0.3601 7 1 high-amp 6;7 0.1208 0.7399 0.1632 7 -0.514 39.06 -0.0211 0.0952 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
161 1029_0I chr6 304553 411129 1029_0I-T1-TDNA-1_A23KCGYLT4_1 91 24 0.5329 0.521 0.6407 2861.0 0.5777 0.3385 4 1 amp 1;3;6;7 0.4099 0.7399 0.554 7 -0.514 13.95 0.0373 -0.0353 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
162 1029_0I chr6 411129 29676995 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3292 453 0.491 0.4895 0.6327 568.2 0.5402 0.3097 6 1 amp 2;6 0.1833 0.7399 0.2477 7 -0.514 72.74 0.0404 -0.0396 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
163 1029_0I chr6 29722888 29944121 1029_0I-T1-TDNA-1_A23KCGYLT4_1 104 103 0.1458 0.2349 0.647 8556.5 0.5976 0.3769 3 0 amp 2;5 0.2129 0.7399 0.2877 7 -0.514 15.12 -0.0001 0.0032 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
164 1029_0I chr6 29944664 29945804 1029_0I-T1-TDNA-1_A23KCGYLT4_1 25 41 -0.6569 -0.5426 0.5521 4953.0 0.2081 0.05 0 0 del 3;4;5;7 0.3623 0.7399 0.4897 7 -0.514 8.48 -0.0078 0.1978 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
165 1029_0I chr6 29945744 29948387 1029_0I-T1-TDNA-1_A23KCGYLT4_1 12 36 0.7399 0.7571 0.613 15151.1 0.458 0.2683 6 2 amp 1;5;7 0.3447 0.7399 0.4658 7 -0.514 9.03 -0.0166 0.0396 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
166 1029_0I chr6 29948387 31357708 1029_0I-T1-TDNA-1_A23KCGYLT4_1 755 223 0.3721 0.3554 0.559 1242.5 0.233 0.1042 6 2 amp 2;7 0.1412 0.7399 0.1909 7 -0.514 25.8 0.0132 -0.0067 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
167 1029_0I chr6 31362126 31539271 1029_0I-T1-TDNA-1_A23KCGYLT4_1 58 46 0.4957 0.4499 0.6267 913.8 0.517 0.2702 5 1 amp 4;6;7 0.2379 0.7399 0.3216 7 -0.514 12.16 0.0554 -0.047 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
168 1029_0I chr6 31539211 32196999 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1024 110 0.382 0.3728 0.629 1055.0 0.5235 0.2912 4 1 amp 2;3;6;7 0.3175 0.7399 0.429 7 -0.514 32.08 -0.0158 0.0118 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
169 1029_0I chr6 32196978 33009643 1029_0I-T1-TDNA-1_A23KCGYLT4_1 529 343 0.4068 0.4139 0.5967 6851.0 0.3896 0.1976 3 1 amp 1;4;5;6;7 0.5433 0.7399 0.7342 7 -0.514 28.31 0.0601 -0.0518 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
170 1029_0I chr6 33064538 33087938 1029_0I-T1-TDNA-1_A23KCGYLT4_1 71 227 0.3813 0.3727 0.5413 8539.8 0.1644 0.028 5 2 amp 4;6 0.1986 0.7399 0.2684 7 -0.514 9.63 0.0052 0.0036 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
171 1029_0I chr6 33087938 33089738 1029_0I-T1-TDNA-1_A23KCGYLT4_1 14 28 0.7889 0.67 0.5814 18637.5 0.3275 0.1459 5 2 amp 1;2;4;6 0.4948 0.7399 0.6687 7 -0.514 8.22 -0.012 0.0367 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
172 1029_0I chr6 33163609 47309567 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3974 495 0.4175 0.42 0.6389 685.5 0.5675 0.3341 5 1 amp 5;6;7 0.2318 0.7399 0.3133 7 -0.514 69.72 -0.013 0.0122 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
173 1029_0I chr6 47478158 134006935 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8681 1027 0.2926 0.1902 0.6168 370.3 0.4712 0.245 3 1 amp 1;4;5;6 0.5039 0.7399 0.681 7 -0.514 73.79 -0.0316 0.0265 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
174 1029_0I chr6 134028534 170584636 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5293 609 0.4163 0.3794 0.6085 651.2 0.4386 0.2081 4 1 amp 3;5;6 0.2872 0.7399 0.3882 7 -0.514 76.91 0.052 -0.0442 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
175 1029_0I chr7 193154 78168132 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8716 1286 0.7648 0.7246 0.5257 789.5 0.1017 0.0168 6 3 amp 4;5;6;7 0.349 0.7399 0.4716 7 -0.514 171.98 0.001 0.0745 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
176 1029_0I chr7 78177996 87398678 1029_0I-T1-TDNA-1_A23KCGYLT4_1 779 92 0.5194 0.3511 0.5282 575.5 0.1122 0.0181 4 2 amp 1;4;6;7 0.4323 0.7399 0.5842 7 -0.514 34.94 0.0011 0.0797 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
177 1029_0I chr7 87402095 87566894 1029_0I-T1-TDNA-1_A23KCGYLT4_1 152 2 0.8997 0.9137 0.527 1280.0 0.1078 0.0098 6 0 amp 1;4;6;7 0.4323 0.7399 0.5842 7 -0.514 26.7 0.0009 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
178 1029_0I chr7 87566857 95290303 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1134 126 0.5955 0.5278 0.5304 490.0 0.1204 0.0202 4 2 amp 1;2;3;6;7 0.5118 0.7399 0.6916 7 -0.514 48.32 -0.0008 0.0857 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
179 1029_0I chr7 95298927 100320009 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1070 81 0.0485 0.064 0.8294 355.0 1.5497 2.4518 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 33.79 0.0485 0.0051 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
180 1029_0I chr7 100358278 100682847 1029_0I-T1-TDNA-1_A23KCGYLT4_1 258 7 0.6868 0.656 0.8857 1196.0 2.0194 4.2774 4 0 amp 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 29.56 -0.0117 -0.0043 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
181 1029_0I chr7 100682979 100951969 1029_0I-T1-TDNA-1_A23KCGYLT4_1 242 61 -0.0546 -0.0704 0.8451 705.0 1.6824 2.8494 2 0 cn-loh 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 31.62 -0.0546 -0.0703 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
182 1029_0I chr7 100952019 100952453 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3 13 0.0458 0.0564 0.7069 2372.0 0.877 0.8096 2 0 cn-loh 1;2;5 0.4072 0.7399 0.5503 7 -0.514 7.55 0.0458 -0.0005 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
183 1029_0I chr7 100952469 100959476 1029_0I-T1-TDNA-1_A23KCGYLT4_1 44 1 -0.3596 -0.4276 0.6533 2117.0 0.6332 1 0 del 1;3;5;7 0.4395 0.7399 0.594 7 -0.514 5.74 -0.0016 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
184 1029_0I chr7 100959509 100960636 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8 21 0.0163 0.0282 0.6936 1904.7 0.7968 0.6642 2 0 cn-loh 1;2;6 0.3776 0.7399 0.5103 7 -0.514 8.87 0.0163 0.0042 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
185 1029_0I chr7 100960733 100991020 1029_0I-T1-TDNA-1_A23KCGYLT4_1 18 14 -0.0774 0.0918 0.5573 1378.3 0.2281 0.0652 1 0 del 4;7 0.1565 0.7399 0.2115 7 -0.514 2.05 0.0402 0.0385 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
186 1029_0I chr7 100991067 100993529 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7 7 0.1163 0.0023 0.8825 2287.5 1.9879 3.7306 2 0 cn-loh 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 12.85 0.1163 0.0989 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
187 1029_0I chr7 100993600 100998435 1029_0I-T1-TDNA-1_A23KCGYLT4_1 26 2 -0.5157 -0.4322 0.6199 1323.5 0.4858 0.2668 0 0 del 2;4;6 0.3004 0.7399 0.406 7 -0.514 6.33 -0.0002 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
188 1029_0I chr7 100998466 101004461 1029_0I-T1-TDNA-1_A23KCGYLT4_1 27 7 -0.385 -0.5059 0.789 2695.5 1.2776 1.9527 1 0 del 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 9.65 0.2371 0.0976 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
189 1029_0I chr7 101004497 101004861 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3 6 0.1401 0.0453 0.807 1933.0 1.4217 2.0474 2 0 cn-loh 1;2;4;5;6 0.6058 0.7399 0.8187 7 -0.514 8.41 0.1401 0.008 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
190 1029_0I chr7 101004866 101038025 1029_0I-T1-TDNA-1_A23KCGYLT4_1 48 7 -0.0341 0.0035 0.8366 341.0 1.6256 2.6507 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 10.21 -0.0341 0.0095 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
191 1029_0I chr7 101038044 101038755 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3 2 0.0773 -0.0168 0.8438 4485.0 1.6784 2.8442 3 0 amp 5 0.111 0.7399 0.15 7 -0.514 0.32 -0.0006 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
192 1029_0I chr7 101038785 101039681 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7 1 0.5954 0.6504 0.8044 2531.0 1.4134 4 0 amp 1;2;3;6;7 0.5118 0.7399 0.6916 7 -0.514 3.79 -0.0009 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
193 1029_0I chr7 101039694 101318269 1029_0I-T1-TDNA-1_A23KCGYLT4_1 164 15 -0.0072 -0.0146 0.8273 587.0 1.5591 2.4245 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 14.4 -0.0072 -0.0002 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
194 1029_0I chr7 101318907 101363203 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5 13 0.0456 0.1245 0.841 275.0 1.6535 2.7466 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 14.14 0.0456 0.0372 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
195 1029_0I chr7 101419920 102254643 1029_0I-T1-TDNA-1_A23KCGYLT4_1 176 18 0.0102 0.0134 0.8502 1654.0 1.7281 3.0062 2 0 cn-loh 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 17.66 0.0102 -0.0203 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
196 1029_0I chr7 102254643 102255003 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3 2 0.007 -0.0053 0.8459 11844.0 1.7022 2 0 cn-loh 1 0.1943 0.7399 0.2626 7 -0.514 0.03 0.007 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
197 1029_0I chr7 102255003 102256923 1029_0I-T1-TDNA-1_A23KCGYLT4_1 16 0 -0.1137 -0.0751 1 0 del 5;7 0.1504 0.7399 0.2032 7 -0.514 1.09 -0.0009 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
198 1029_0I chr7 102256923 102257283 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3 1 -0.5873 -0.6292 0.8342 14093.0 1.6153 0 0 del 2;5;6;7 0.3337 0.7399 0.4509 7 -0.514 2.45 -0.0016 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
199 1029_0I chr7 102257283 102280892 1029_0I-T1-TDNA-1_A23KCGYLT4_1 20 2 -0.1992 0.1061 0.8743 1472.0 1.9374 3.7474 1 0 del 2;4;7 0.2584 0.7399 0.3492 7 -0.514 2.14 0.0004 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
200 1029_0I chr7 102281819 102282804 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4 3 -0.1513 0.0316 0.8619 2681.0 1.8278 3.3427 2 0 cn-loh 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 7.66 -0.1513 0.0789 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
201 1029_0I chr7 102282995 103316148 1029_0I-T1-TDNA-1_A23KCGYLT4_1 248 30 0.0162 -0.0154 0.8085 410.5 1.3746 2.3744 2 0 cn-loh 1;2;4;5;6 0.6058 0.7399 0.8187 7 -0.514 18.61 0.0162 -0.0036 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
202 1029_0I chr7 103316828 117368758 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1690 121 0.7834 0.712 0.5309 550.0 0.1224 0.0177 6 3 amp 3;4;5;7 0.3623 0.7399 0.4897 7 -0.514 77.55 -0.0029 0.0897 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
203 1029_0I chr7 117379904 127583363 1029_0I-T1-TDNA-1_A23KCGYLT4_1 835 115 0.5427 0.3865 0.5363 549.0 0.1443 0.0297 5 2 amp 3;5;6 0.2872 0.7399 0.3882 7 -0.514 37.86 0.0258 -0.09 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
204 1029_0I chr7 127584153 159144810 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5780 647 0.7658 0.7537 0.5366 887.0 0.1426 0.0234 4 2 amp 1;2;3;4;5;6 0.7006 0.7399 0.9468 7 -0.514 140.33 -0.0002 0.1199 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
205 1029_0I chr8 166190 11750294 1029_0I-T1-TDNA-1_A23KCGYLT4_1 906 233 -0.0024 -0.016 0.7807 452.5 1.1945 2.0852 2 0 cn-loh 1;2;3;4;7 0.5475 0.7399 0.7399 7 -0.514 45.6 -0.0024 0.0026 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
206 1029_0I chr8 11754931 11771644 1029_0I-T1-TDNA-1_A23KCGYLT4_1 30 20 -0.1891 -0.158 0.8336 1581.0 1.6092 2.5946 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 17.43 -0.1891 0.0109 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
207 1029_0I chr8 11779567 13021130 1029_0I-T1-TDNA-1_A23KCGYLT4_1 102 28 0.0243 -0.0869 0.8234 458.0 1.5085 2.3213 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 19.28 0.0243 -0.0076 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
208 1029_0I chr8 13021131 13133033 1029_0I-T1-TDNA-1_A23KCGYLT4_1 46 23 0.1141 0.1195 0.8226 1111.0 1.5191 2.3296 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 17.65 0.1141 0.0003 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
209 1029_0I chr8 13276205 17280509 1029_0I-T1-TDNA-1_A23KCGYLT4_1 161 20 -0.5131 -0.5251 0.8215 130.0 1.4796 2.2682 1 0 del 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 22.25 0.1534 0.1097 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
210 1029_0I chr8 17284446 23680468 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1105 239 -0.0093 -0.0131 0.8351 429.0 1.5954 2.5849 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 59.35 -0.0093 0.0033 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
211 1029_0I chr8 23680468 23681068 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5 3 -0.2608 -0.1849 0.8247 13951.0 1.548 2.3964 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 6.62 -0.2608 0.0079 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
212 1029_0I chr8 23681068 23845094 1029_0I-T1-TDNA-1_A23KCGYLT4_1 26 5 -0.2329 -0.1861 0.8325 1834.5 1.593 2.4699 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 9.05 -0.2329 0.0044 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
213 1029_0I chr8 23851298 31085296 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1129 141 0.0166 -0.0135 0.827 288.0 1.5387 2.4127 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 43.7 0.0166 0.0076 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
214 1029_0I chr8 31087726 31116442 1029_0I-T1-TDNA-1_A23KCGYLT4_1 27 1 -0.8973 -0.9491 0.8963 540.0 2.1489 0 0 del 2;3;4;5;7 0.4642 0.7399 0.6273 7 -0.514 11.22 0.0029 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
215 1029_0I chr8 31116339 32548878 1029_0I-T1-TDNA-1_A23KCGYLT4_1 108 28 -0.2567 -0.2497 0.8271 1478.0 1.5608 2.4457 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 20.83 -0.2567 0.0106 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
216 1029_0I chr8 32554941 32635075 1029_0I-T1-TDNA-1_A23KCGYLT4_1 151 5 0.039 0.082 0.7531 4847.0 1.0764 1.8423 2 0 cn-loh 1;2;3;5 0.502 0.7399 0.6784 7 -0.514 6.09 0.039 -0.0002 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
217 1029_0I chr8 32635075 32635435 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3 2 -0.5296 -0.5287 0.8066 4091.0 1.4229 2.0393 0 0 del 2;3;5 0.3077 0.7399 0.4158 7 -0.514 2.21 0.0009 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
218 1029_0I chr8 32635435 32658475 1029_0I-T1-TDNA-1_A23KCGYLT4_1 160 0 -0.1918 -0.1815 1 0 del 3;4;7 0.2513 0.7399 0.3396 7 -0.514 5.84 0.0019 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
219 1029_0I chr8 32658595 32693875 1029_0I-T1-TDNA-1_A23KCGYLT4_1 204 31 0.0483 0.0389 0.8088 6260.0 1.4357 2.1121 2 0 cn-loh 1;2;3;4;5 0.6192 0.7399 0.8368 7 -0.514 19.4 0.0483 -0.0151 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
220 1029_0I chr8 32693875 32714755 1029_0I-T1-TDNA-1_A23KCGYLT4_1 126 3 0.0968 0.2368 0.8184 4052.0 1.5025 2.2878 2 0 cn-loh 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 6.79 0.0968 0.0137 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
221 1029_0I chr8 32714755 32725075 1029_0I-T1-TDNA-1_A23KCGYLT4_1 62 12 0.0693 0.0171 0.8157 7399.0 1.4854 2.2083 2 0 cn-loh 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 12.48 0.0693 -0.0011 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
222 1029_0I chr8 32725075 32766857 1029_0I-T1-TDNA-1_A23KCGYLT4_1 269 3 0.039 0.0805 0.8311 2099.0 1.585 2.5369 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 6.79 0.039 -0.0044 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
223 1029_0I chr8 32766857 32767457 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5 3 -0.4922 -0.437 0.8239 10332.0 1.5429 2.38 1 0 del 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 6.97 0.1743 0.1883 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
224 1029_0I chr8 32767457 37797569 1029_0I-T1-TDNA-1_A23KCGYLT4_1 271 14 0.0317 -0.0133 0.8329 405.5 1.5944 2.56 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 14.27 0.0317 -0.0137 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
225 1029_0I chr8 37814871 37841656 1029_0I-T1-TDNA-1_A23KCGYLT4_1 65 7 -0.0834 -0.0415 0.8357 2018.0 1.62 2.6348 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 10.44 -0.0834 0.0284 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
226 1029_0I chr8 37841551 37841791 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3 2 -0.2586 -0.2696 0.8465 6117.0 1.7069 2.9123 1 0 del 1;3;7 0.3285 0.7399 0.4439 7 -0.514 1.08 0.0002 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
227 1029_0I chr8 37841791 38268518 1029_0I-T1-TDNA-1_A23KCGYLT4_1 195 16 -0.0429 -0.0076 0.8285 354.0 1.5437 2.4432 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 14.93 -0.0429 -0.0013 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
228 1029_0I chr8 38268764 38273033 1029_0I-T1-TDNA-1_A23KCGYLT4_1 29 5 0.0721 0.1267 0.8147 9076.0 1.4789 2.2015 2 0 cn-loh 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 8.04 0.0721 -0.0068 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
229 1029_0I chr8 38273393 38426430 1029_0I-T1-TDNA-1_A23KCGYLT4_1 236 9 0.0376 0.069 0.8373 891.0 1.6309 2.676 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 11.8 0.0376 0.0311 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
230 1029_0I chr8 38426430 38443230 1029_0I-T1-TDNA-1_A23KCGYLT4_1 120 17 -0.315 -0.2159 0.8291 11529.0 1.5777 2.4859 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 17.77 -0.315 -0.0086 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
231 1029_0I chr8 38443230 38453310 1029_0I-T1-TDNA-1_A23KCGYLT4_1 53 0 -0.2582 -0.1019 1 0 del 1;3;7 0.3285 0.7399 0.4439 7 -0.514 4.52 0.0006 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
232 1029_0I chr8 38453310 38454750 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8 3 -0.1203 -0.0792 0.8344 11979.0 1.6169 2.6144 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 6.81 -0.1203 0.0295 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
233 1029_0I chr8 38454750 38460750 1029_0I-T1-TDNA-1_A23KCGYLT4_1 38 0 -0.2054 -0.1257 1 0 del 4;5;7 0.2675 0.7399 0.3616 7 -0.514 3.05 0.0018 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
234 1029_0I chr8 38460750 38464830 1029_0I-T1-TDNA-1_A23KCGYLT4_1 21 2 0.0366 -0.0206 0.8307 16255.0 1.5905 2.5297 3 0 amp 7 0.0394 0.7399 0.0532 7 -0.514 0.4 0.0085 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
235 1029_0I chr8 38464830 38466750 1029_0I-T1-TDNA-1_A23KCGYLT4_1 16 0 -0.3962 -0.3981 1 0 del 1;3;5;6 0.4816 0.7399 0.6508 7 -0.514 3.81 0.0012 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
236 1029_0I chr8 38466750 38467710 1029_0I-T1-TDNA-1_A23KCGYLT4_1 8 3 -0.5345 -0.494 0.8476 15922.0 1.7136 2.8514 1 0 del 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 8.05 0.132 0.3627 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
237 1029_0I chr8 38467710 39077333 1029_0I-T1-TDNA-1_A23KCGYLT4_1 112 23 0.0845 -0.0199 0.8261 349.8 1.5339 2.3895 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 17.75 0.0845 0.0057 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
238 1029_0I chr8 39077308 39914015 1029_0I-T1-TDNA-1_A23KCGYLT4_1 140 10 -0.6604 -0.6632 0.8253 153.0 1.5051 2.2885 1 0 del 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 22.0 0.0061 0.1413 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
239 1029_0I chr8 39917832 42732549 1029_0I-T1-TDNA-1_A23KCGYLT4_1 624 48 0.0698 0.0987 0.8288 601.5 1.5673 2.4763 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 26.28 0.0698 0.0107 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
240 1029_0I chr8 42736462 49075306 1029_0I-T1-TDNA-1_A23KCGYLT4_1 581 4 0.2088 0.1776 0.8221 203.5 1.4949 2.3278 3 0 amp 1;3;5;6;7 0.5209 0.7399 0.704 7 -0.514 14.07 -0.1252 0.0249 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
241 1029_0I chr8 50394178 55879909 1029_0I-T1-TDNA-1_A23KCGYLT4_1 406 42 -0.0541 -0.1626 0.8315 434.5 1.5769 2.5099 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 24.62 -0.0541 -0.0224 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
242 1029_0I chr8 55879909 56010719 1029_0I-T1-TDNA-1_A23KCGYLT4_1 50 11 0.225 0.2413 0.8225 873.2 1.5275 2.3335 3 0 amp 1;2;4;6;7 0.5341 0.7399 0.7219 7 -0.514 12.7 -0.1165 0.0158 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
243 1029_0I chr8 56010719 56166371 1029_0I-T1-TDNA-1_A23KCGYLT4_1 37 12 0.0126 0.0612 0.8337 4207.5 1.6099 2.5901 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 13.44 0.0126 0.0194 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
244 1029_0I chr8 56166398 73878918 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1500 172 -0.0249 -0.098 0.8179 317.5 1.4817 2.2251 2 0 cn-loh 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 46.39 -0.0249 -0.0017 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
245 1029_0I chr8 73945430 74237332 1029_0I-T1-TDNA-1_A23KCGYLT4_1 39 19 0.4007 0.2816 0.8255 731.0 1.5473 2.4116 3 0 amp 1;2;3;4;7 0.5475 0.7399 0.7399 7 -0.514 17.2 0.0516 -0.008 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
246 1029_0I chr8 74244531 89931438 1029_0I-T1-TDNA-1_A23KCGYLT4_1 827 86 -0.1174 -0.2113 0.8206 220.0 1.4868 2.3035 2 0 cn-loh 1;2;3;5;6;7 0.6228 0.7399 0.8417 7 -0.514 33.96 -0.1174 0.0075 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
247 1029_0I chr8 89931438 89995675 1029_0I-T1-TDNA-1_A23KCGYLT4_1 92 33 0.0131 0.0235 0.8242 1877.0 1.5367 2.3993 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 21.26 0.0131 -0.0072 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
248 1029_0I chr8 90001466 91959241 1029_0I-T1-TDNA-1_A23KCGYLT4_1 155 25 -0.5923 -0.5131 0.8383 126.0 1.6215 2.6391 1 0 del 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 26.06 0.0742 0.2277 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
249 1029_0I chr8 91959241 91960561 1029_0I-T1-TDNA-1_A23KCGYLT4_1 12 4 0.0127 0.0967 0.8305 1758.0 1.5668 2.3721 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 7.61 0.0127 -0.0103 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
250 1029_0I chr8 91970633 103420467 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1607 188 0.0441 -0.0183 0.8283 290.5 1.55 2.44 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 50.93 0.0441 -0.0071 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
251 1029_0I chr8 103420942 112234514 1029_0I-T1-TDNA-1_A23KCGYLT4_1 585 46 -0.2569 -0.389 0.8227 161.5 1.5036 2.3242 2 0 cn-loh 1;2;3;4;6;7 0.6289 0.7399 0.85 7 -0.514 28.45 -0.2569 -0.0073 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
252 1029_0I chr8 112237174 116771754 1029_0I-T1-TDNA-1_A23KCGYLT4_1 225 15 -0.7751 -0.7445 0.8033 159.0 1.3462 1.8853 1 0 del 1;2;3;4;5;6;7 0.7399 0.7399 1.0 7 -0.514 30.7 -0.1086 -0.0031 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
253 1029_0I chr8 116771714 116874814 1029_0I-T1-TDNA-1_A23KCGYLT4_1 75 20 -0.1763 -0.3536 0.8377 1036.0 1.6308 2.6892 2 0 cn-loh 1;2;3;4;5;7 0.6585 0.7399 0.89 7 -0.514 17.9 -0.1763 0.036 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
254 1029_0I chr8 116879776 145054212 1029_0I-T1-TDNA-1_A23KCGYLT4_1 3908 604 -0.065 -0.0713 0.8253 455.8 1.5287 2.4503 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 90.8 -0.065 0.0055 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
255 1029_0I chr9 15056 39074042 1029_0I-T1-TDNA-1_A23KCGYLT4_1 5005 601 0.0035 -0.038 0.8279 456.0 1.5484 2.4688 2 0 cn-loh 1;2;4;5;6;7 0.6451 0.7399 0.8719 7 -0.514 91.13 0.0035 -0.0004 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
256 1029_0I chr9 39078636 68384558 1029_0I-T1-TDNA-1_A23KCGYLT4_1 395 42 -0.4931 -0.506 0.6372 689.0 0.5133 0.2593 1 0 del 2;4;5;6;7 0.4508 0.7399 0.6093 7 -0.514 25.03 -0.1246 -0.0665 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
257 1029_0I chr9 68387411 77728711 1029_0I-T1-TDNA-1_A23KCGYLT4_1 1104 142 0.6935 0.6504 0.8861 505.0 2.0223 4.1684 4 0 amp 1;2;3;4;5 0.6192 0.7399 0.8368 7 -0.514 80.42 -0.0017 0.0007 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
258 1029_0I chr9 77794408 109943425 1029_0I-T1-TDNA-1_A23KCGYLT4_1 4605 482 0.0238 -0.0029 0.8233 580.5 1.5236 2.3876 2 0 cn-loh 1;3;4;5;6;7 0.6381 0.7399 0.8623 7 -0.514 80.23 0.0238 -0.0041 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
259 1029_0I chr9 110015894 138231128 1029_0I-T1-TDNA-1_A23KCGYLT4_1 7613 968 0.7078 0.7218 0.5203 806.8 0.0806 0.0104 6 3 amp 2;3;6;7 0.3175 0.7399 0.429 7 -0.514 148.7 -0.0014 0.0532 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
260 1029_0I chrX 2853959 24715229 1029_0I-T1-TDNA-1_A23KCGYLT4_1 2035 0 -0.1847 -0.2121 4 0 amp 2;5;7 0.2523 0.7399 0.3409 7 -0.514 20.05 -0.5092 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
261 1029_0I chrX 24716316 37426002 1029_0I-T1-TDNA-1_A23KCGYLT4_1 632 0 -0.4163 -0.607 2 0 amp 1;2;3;5 0.502 0.7399 0.6784 7 -0.514 25.19 -0.4163 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
262 1029_0I chrX 37453135 155545278 1029_0I-T1-TDNA-1_A23KCGYLT4_1 12903 0 -0.3074 -0.3573 3 0 amp 2;3;5 0.3077 0.7399 0.4158 7 -0.514 84.04 -0.5138 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
263 1029_0I chrY 2786997 2979990 1029_0I-T1-TDNA-1_A23KCGYLT4_1 37 0 -2.3187 -2.2999 0 0 del 1;3;4;5;6 0.5987 0.7399 0.8091 7 -0.514 33.95 -1.0014 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
264 1029_0I chrY 6868036 20779689 1029_0I-T1-TDNA-1_A23KCGYLT4_1 279 0 -0.3196 -0.4127 5 0 high-amp 5;7 0.1504 0.7399 0.2032 7 -0.514 12.85 -0.6131 0.0 tumor A23KCGYLT4 1029_0I-T1-TDNA-1_A23KCGYLT4_1
265 rows