.command.sh - Workdir - SOMATIC_CNV_REF_BUILDER:SOMA_CNV_BUILD_REFERENCE (build_reference)

File Info

Filename: .command.sh
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/649fa7979c20e43d49e76920028655/.command.sh
Size: 202 bytes
Task: SOMATIC_CNV_REF_BUILDER:SOMA_CNV_BUILD_REFERENCE (build_reference)
Attempt

Content

#!/bin/bash -Ceuo pipefail
python /usr/local/bin/build_norm_reference.py \
    --manifest manifest.tsv \
    --gc-reference /usr/local/share/probe_gc_content.tsv \
    --output-dir . \
    --workers 16