File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/965925b14f394ff2d3f163c6134e8e/.command.log
Size
917 bytes
Task
SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (1029_16G-T1-TDNA-1_B23KFCWLT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/0747429b2f90e635dec0446a11b224/1029_16G-T1-TDNA-1_B23KFCWLT4_1_probes.tsv.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/965925b14f394ff2d3f163c6134e8e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/407194b773db0380f2a8eeb9bc6730/sex_calls.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/965925b14f394ff2d3f163c6134e8e/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/407194b773db0380f2a8eeb9bc6730/batch_reference.parquet
==> STAGING COMPLETE (5 inputs)

Loaded 472,386 probes for 1029_16G-T1-TDNA-1_B23KFCWLT4_1
  Sex homology mask: 1494 probes set to mask=2
  5-feature GAM: R²=0.8725
  Wrote 1029_16G-T1-TDNA-1_B23KFCWLT4_1_normalized.parquet
  Wrote feature stats to 1029_16G-T1-TDNA-1_B23KFCWLT4_1_gam_stats.json
  Done in 12.8s