File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/6bfe091451428b35433de78ded4d10/.command.log
Size
913 bytes
Task
SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (1029_0I-T1-TDNA-1_A23KCGYLT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/6bfe091451428b35433de78ded4d10/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/407194b773db0380f2a8eeb9bc6730/sex_calls.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/6bfe091451428b35433de78ded4d10/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/b9867dfcc9e4c24d9de7a35c655241/1029_0I-T1-TDNA-1_A23KCGYLT4_1_probes.tsv.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/407194b773db0380f2a8eeb9bc6730/batch_reference.parquet
==> STAGING COMPLETE (5 inputs)

Loaded 472,386 probes for 1029_0I-T1-TDNA-1_A23KCGYLT4_1
  Sex homology mask: 1494 probes set to mask=2
  5-feature GAM: R²=0.8037
  Wrote 1029_0I-T1-TDNA-1_A23KCGYLT4_1_normalized.parquet
  Wrote feature stats to 1029_0I-T1-TDNA-1_A23KCGYLT4_1_gam_stats.json
  Done in 13.7s