File Info
- Filename
- 1029_16G_segments.tsv
- Full Path
- s3://ai-pipelines-experiment/chnobles/nf_soma_cnv_inline11/results/blood_only/segments/1029_16G_segments.tsv
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- Workflow Run
- nf-soma-cnv-inline11
- Published
- Jun 02, 2026 2:51 PM
Content
View in new tab| seg_id | specimen_id | chrom | start | end | tumor_sample_id | normal_sample_id | n_probes | n_het_sites | cnlr_median | cnlr_wmean | mean_mbaf | median_het_depth | mean_valor | mafR | tcn | lcn | call | clone_subset | clone_purity | purity | clonal_frac | n_clones | dipLogR | z_score | residual_lr | residual_lor | germline_fit | sample_type | flowcell | sample_id |
| 1 | 1029_16G | chr1 | 69641 | 26696238 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 7450 | 1316 | 0.0562 | 0.0541 | 0.5449 | 202.0 | 0.1771 | 0.0465 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 34.81 | 0.0562 | 0.1239 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 2 | 1029_16G | chr1 | 26696238 | 27322400 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 402 | 8 | 0.1951 | 0.1455 | 0.5238 | 275.0 | 0.0941 | 0.0081 | 4 | 2 | amp | 1 | 0.1437 | 1.0 | 0.1437 | 1 | -0.04 | 23.07 | 0.0013 | 0.0472 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 3 | 1029_16G | chr1 | 27330711 | 248060917 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 34408 | 4062 | 0.0427 | 0.0358 | 0.5375 | 185.5 | 0.1481 | 0.0306 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 53.34 | 0.0427 | 0.0917 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 4 | 1029_16G | chr1 | 248060921 | 248918363 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 230 | 37 | 0.0687 | 0.0274 | 0.5987 | 630.2 | 0.3923 | 0.1692 | 3 | 0 | amp | 1 | 0.1437 | 1.0 | 0.1437 | 1 | -0.04 | 11.64 | -0.0314 | -0.0396 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 5 | 1029_16G | chr10 | 47057 | 121481572 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 14813 | 2097 | 0.0418 | 0.0365 | 0.5346 | 162.5 | 0.1367 | 0.0253 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 33.7 | 0.0418 | 0.076 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 6 | 1029_16G | chr10 | 121481572 | 133625218 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 1953 | 436 | 0.0373 | 0.0275 | 0.5347 | 253.0 | 0.1366 | 0.0379 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 12.71 | 0.0373 | 0.0889 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 7 | 1029_16G | chr10 | 133625291 | 133626762 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 6 | 9 | -0.1536 | -0.0806 | 0.6262 | 661.1 | 0.5142 | 0.2652 | 1 | 0 | del | 1 | 0.3641 | 1.0 | 0.3641 | 1 | -0.04 | 6.79 | 0.1364 | 0.0321 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 8 | 1029_16G | chr11 | 193064 | 1009217 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 658 | 153 | 0.0351 | 0.0267 | 0.5407 | 224.0 | 0.1613 | 0.0256 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 8.01 | 0.0351 | 0.1099 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 9 | 1029_16G | chr11 | 1009306 | 1018432 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 21 | 43 | -0.1533 | -0.1266 | 0.619 | 570.0 | 0.4785 | 0.2477 | 1 | 0 | del | 1 | 0.2869 | 1.0 | 0.2869 | 1 | -0.04 | 13.72 | 0.0701 | 0.1137 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 10 | 1029_16G | chr11 | 1018482 | 1622084 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 489 | 127 | -0.0083 | -0.0262 | 0.5398 | 328.0 | 0.1579 | 0.0329 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 5.84 | -0.0083 | 0.1155 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 11 | 1029_16G | chr11 | 1629849 | 1630554 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 5 | 4 | -0.3563 | -0.2369 | 0.6153 | 596.0 | 0.468 | 0.2182 | 1 | 0 | del | 1 | 0.3641 | 1.0 | 0.3641 | 1 | -0.04 | 6.08 | -0.0663 | -0.0158 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 12 | 1029_16G | chr11 | 1697218 | 134387716 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 21970 | 2936 | 0.0367 | 0.0289 | 0.5397 | 207.0 | 0.157 | 0.0332 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 40.53 | 0.0367 | 0.1037 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 13 | 1029_16G | chr12 | 66830 | 25235294 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 5701 | 808 | 0.0328 | 0.0278 | 0.5287 | 214.5 | 0.1138 | 0.0216 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 16.45 | 0.0328 | 0.0604 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 14 | 1029_16G | chr12 | 25236047 | 43786748 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 1904 | 309 | -0.0005 | -0.0171 | 0.5512 | 144.0 | 0.2022 | 0.0477 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 10.79 | -0.0005 | 0.139 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 15 | 1029_16G | chr12 | 43795549 | 45926699 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 307 | 19 | 0.1088 | 0.1081 | 0.5541 | 195.0 | 0.2147 | 0.0505 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 11.65 | 0.1088 | 0.1601 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 16 | 1029_16G | chr12 | 45927178 | 49025310 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 840 | 155 | 0.0203 | 0.0149 | 0.5399 | 184.0 | 0.1586 | 0.0286 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 6.55 | 0.0203 | 0.1011 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 17 | 1029_16G | chr12 | 49026138 | 49055338 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 562 | 3 | 0.2583 | 0.2494 | 0.5018 | 5105.0 | 0.0071 | 0.0 | 4 | 2 | amp | 1 | 0.1965 | 1.0 | 0.1965 | 1 | -0.04 | 36.1 | -0.0005 | 0.0 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 18 | 1029_16G | chr12 | 49055254 | 57089372 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 3629 | 370 | 0.0122 | 0.0062 | 0.5461 | 223.0 | 0.1816 | 0.0491 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 11.97 | 0.0122 | 0.1315 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 19 | 1029_16G | chr12 | 57091072 | 133234376 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 12079 | 1490 | 0.0361 | 0.0311 | 0.5327 | 167.0 | 0.1293 | 0.0241 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 26.2 | 0.0361 | 0.0692 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 20 | 1029_16G | chr13 | 19173833 | 112068417 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 7583 | 1038 | 0.0333 | 0.0219 | 0.5335 | 154.5 | 0.1323 | 0.0257 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 19.78 | 0.0333 | 0.07 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 21 | 1029_16G | chr13 | 112068475 | 114243967 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 563 | 136 | -0.0397 | -0.0424 | 0.5478 | 142.0 | 0.1891 | 0.032 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 8.49 | -0.0397 | 0.1248 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 22 | 1029_16G | chr13 | 114243907 | 114246115 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 7 | 1 | -0.2239 | -0.5445 | 0.6111 | 90.0 | 0.4469 | 0 | 0 | del | 1 | 0.1437 | 1.0 | 0.1437 | 1 | -0.04 | 3.49 | -0.0 | 0.0 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | ||
| 23 | 1029_16G | chr13 | 114246877 | 114326203 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 43 | 4 | -0.0718 | -0.1185 | 0.5681 | 193.0 | 0.2717 | 0.0662 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 3.37 | -0.0718 | 0.2167 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 24 | 1029_16G | chr14 | 18601119 | 105589813 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 12332 | 1576 | -0.0063 | -0.0137 | 0.5376 | 163.0 | 0.1485 | 0.0301 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 15.99 | -0.0063 | 0.0882 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 25 | 1029_16G | chr14 | 105602323 | 105629138 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 28 | 13 | 0.1155 | 0.1772 | 0.5852 | 3234.4 | 0.3412 | 0.1184 | 5 | 0 | amp | 1 | 0.0684 | 1.0 | 0.0684 | 1 | -0.04 | 6.37 | -0.0254 | 0.0174 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 26 | 1029_16G | chr14 | 105644278 | 105645453 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 11 | 12 | 0.1175 | 0.0487 | 0.5357 | 3655.7 | 0.1414 | 0.0166 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 3.04 | 0.1175 | 0.1298 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 27 | 1029_16G | chr14 | 105645393 | 105646247 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 9 | 5 | 0.0274 | -0.0333 | 0.6714 | 4262.0 | 0.7133 | 0.5129 | 2 | 0 | cn-loh | 1 | 0.3641 | 1.0 | 0.3641 | 1 | -0.04 | 6.95 | 0.0274 | -0.061 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 28 | 1029_16G | chr14 | 105646187 | 105646487 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 4 | 8 | -0.0462 | -0.0686 | 0.5948 | 7613.5 | 0.3757 | 0.1523 | 2 | 0 | cn-loh | 1 | 0.1965 | 1.0 | 0.1965 | 1 | -0.04 | 4.71 | -0.0462 | -0.0235 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 29 | 1029_16G | chr14 | 105646427 | 105770001 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 129 | 47 | 0.0504 | 0.0318 | 0.5354 | 2750.0 | 0.1396 | 0.0192 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 5.11 | 0.0504 | 0.1266 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 30 | 1029_16G | chr14 | 105770059 | 105772783 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 18 | 12 | -0.2157 | -0.2695 | 0.5691 | 3814.5 | 0.2767 | 0.0963 | 1 | 0 | del | 1 | 0.2869 | 1.0 | 0.2869 | 1 | -0.04 | 6.75 | 0.0077 | -0.0729 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 31 | 1029_16G | chr14 | 105772723 | 105773026 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 5 | 11 | 0.146 | 0.1389 | 0.6181 | 4916.0 | 0.4763 | 0.1769 | 4 | 0 | amp | 1 | 0.1437 | 1.0 | 0.1437 | 1 | -0.04 | 7.15 | -0.0478 | -0.0436 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 32 | 1029_16G | chr14 | 105772990 | 105774073 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 19 | 2 | -0.0486 | -0.0374 | 0.5319 | 3696.0 | 0.1278 | 0.0153 | 2 | 0 | cn-loh | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 1.25 | -0.0486 | 0.0 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 33 | 1029_16G | chr14 | 105774013 | 106874851 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 390 | 53 | 0.0858 | 0.0683 | 0.5567 | 989.8 | 0.2237 | 0.0496 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 11.92 | 0.0858 | 0.2024 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 34 | 1029_16G | chr15 | 20535569 | 43695008 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 4635 | 555 | 0.024 | 0.0119 | 0.5301 | 199.0 | 0.1184 | 0.0251 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 11.71 | 0.024 | 0.064 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 35 | 1029_16G | chr15 | 43695179 | 85768904 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 7557 | 847 | -0.0043 | -0.0117 | 0.539 | 131.0 | 0.1537 | 0.0327 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 11.34 | -0.0043 | 0.0866 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 36 | 1029_16G | chr15 | 85768954 | 101819015 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 3885 | 617 | 0.0342 | 0.0278 | 0.521 | 369.0 | 0.0836 | 0.0124 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 13.4 | 0.0342 | 0.0425 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 37 | 1029_16G | chr16 | 47432 | 3579188 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 2643 | 290 | -0.0108 | -0.0164 | 0.5728 | 227.5 | 0.2871 | 0.115 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 18.36 | -0.0108 | 0.2404 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 38 | 1029_16G | chr16 | 3582286 | 3862167 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 480 | 36 | 0.1715 | 0.1541 | 0.5148 | 1287.5 | 0.059 | 0.0039 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 22.17 | 0.1715 | 0.037 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 39 | 1029_16G | chr16 | 3873880 | 5062624 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 499 | 52 | -0.0145 | -0.0333 | 0.5487 | 156.0 | 0.1913 | 0.0469 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 4.6 | -0.0145 | 0.1315 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 40 | 1029_16G | chr16 | 5065689 | 90075935 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 13451 | 1754 | 0.0547 | 0.0483 | 0.533 | 191.0 | 0.1304 | 0.0255 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 39.85 | 0.0547 | 0.0745 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 41 | 1029_16G | chr17 | 137555 | 83094575 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 24118 | 3286 | 0.0486 | 0.0399 | 0.5377 | 224.0 | 0.1486 | 0.0344 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 50.91 | 0.0486 | 0.0978 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 42 | 1029_16G | chr18 | 47389 | 2673383 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 255 | 66 | -0.024 | -0.0582 | 0.5541 | 158.5 | 0.2132 | 0.0654 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 5.96 | -0.024 | 0.1539 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 43 | 1029_16G | chr18 | 2673988 | 80247372 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 6746 | 872 | 0.0254 | 0.0129 | 0.5269 | 160.0 | 0.1065 | 0.0166 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 13.6 | 0.0254 | 0.0446 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 44 | 1029_16G | chr19 | 110681 | 8843100 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 4701 | 1026 | -0.0118 | -0.0124 | 0.5392 | 182.5 | 0.1546 | 0.0323 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 14.66 | -0.0118 | 0.0981 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 45 | 1029_16G | chr19 | 8843136 | 8927782 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 202 | 79 | 0.0265 | 0.0178 | 0.5531 | 747.2 | 0.2106 | 0.0564 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 7.55 | 0.0265 | 0.184 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 46 | 1029_16G | chr19 | 8932708 | 8980426 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 482 | 99 | 0.2916 | 0.2723 | 0.5243 | 3095.0 | 0.0972 | 0.0112 | 5 | 2 | amp | 1 | 0.1437 | 1.0 | 0.1437 | 1 | -0.04 | 37.91 | 0.0099 | -0.0355 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 47 | 1029_16G | chr19 | 8980391 | 16327291 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 3812 | 389 | 0.0275 | 0.0274 | 0.5361 | 235.0 | 0.1432 | 0.026 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 12.85 | 0.0275 | 0.0926 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 48 | 1029_16G | chr19 | 16327291 | 58571441 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 13824 | 2313 | -0.0019 | -0.0054 | 0.5436 | 190.5 | 0.1717 | 0.0432 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 24.88 | -0.0019 | 0.117 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 49 | 1029_16G | chr2 | 41522 | 241873273 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 33700 | 4042 | 0.046 | 0.0378 | 0.5365 | 190.0 | 0.144 | 0.0329 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 55.61 | 0.046 | 0.0884 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 50 | 1029_16G | chr20 | 87677 | 4177457 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 1081 | 175 | -0.0085 | -0.0152 | 0.5425 | 166.8 | 0.1676 | 0.0337 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 6.55 | -0.0085 | 0.1086 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 51 | 1029_16G | chr20 | 4177469 | 64273595 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 9162 | 1239 | 0.0525 | 0.0463 | 0.5329 | 191.0 | 0.1306 | 0.0216 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 31.78 | 0.0525 | 0.0741 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 52 | 1029_16G | chr21 | 5117108 | 46664423 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 4602 | 766 | 0.0489 | 0.0414 | 0.5416 | 183.0 | 0.1637 | 0.041 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 23.58 | 0.0489 | 0.1078 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 53 | 1029_16G | chr22 | 15528158 | 21960501 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 1529 | 263 | 0.044 | 0.0359 | 0.5416 | 207.0 | 0.1635 | 0.0437 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 12.9 | 0.044 | 0.1113 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 54 | 1029_16G | chr22 | 21962408 | 22895803 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 490 | 71 | 0.1923 | 0.15 | 0.5338 | 1903.0 | 0.1342 | 0.0213 | 6 | 2 | amp | 1 | 0.0684 | 1.0 | 0.0684 | 1 | -0.04 | 25.47 | 0.0073 | -0.0034 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 55 | 1029_16G | chr22 | 22895803 | 23307480 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 401 | 27 | 0.0359 | 0.0351 | 0.5141 | 2714.2 | 0.0561 | 0.0043 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 4.34 | 0.0359 | 0.0411 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 56 | 1029_16G | chr22 | 23307480 | 23307840 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 3 | 3 | 0.0522 | -0.05 | 0.6612 | 3979.0 | 0.6675 | 0.4771 | 2 | 0 | cn-loh | 1 | 0.2869 | 1.0 | 0.2869 | 1 | -0.04 | 5.04 | 0.0522 | 0.0656 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 57 | 1029_16G | chr22 | 23308080 | 23316135 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 35 | 21 | -0.0413 | -0.0348 | 0.5359 | 1432.0 | 0.1427 | 0.0219 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 2.87 | -0.0413 | 0.1228 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 58 | 1029_16G | chr22 | 23316375 | 23573580 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 10 | 12 | -0.2933 | -0.1488 | 0.6145 | 1927.2 | 0.4619 | 0.2277 | 1 | 0 | del | 1 | 0.3641 | 1.0 | 0.3641 | 1 | -0.04 | 8.77 | -0.0033 | -0.0047 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 59 | 1029_16G | chr22 | 23574964 | 24001355 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 208 | 41 | 0.0361 | 0.006 | 0.5334 | 354.0 | 0.1325 | 0.0249 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 4.01 | 0.0361 | 0.0914 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 60 | 1029_16G | chr22 | 24003742 | 50782316 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 6694 | 1084 | 0.0601 | 0.0572 | 0.5373 | 213.0 | 0.1477 | 0.029 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 32.09 | 0.0601 | 0.0948 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 61 | 1029_16G | chr3 | 319726 | 12371936 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 1873 | 407 | 0.0536 | 0.0396 | 0.5283 | 434.8 | 0.1113 | 0.0265 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 15.22 | 0.0536 | 0.0751 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 62 | 1029_16G | chr3 | 12371936 | 129260820 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 15926 | 1842 | 0.0423 | 0.0328 | 0.5397 | 185.0 | 0.1567 | 0.0344 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 36.78 | 0.0423 | 0.1005 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 63 | 1029_16G | chr3 | 129263899 | 198169878 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 9138 | 999 | 0.0579 | 0.0542 | 0.5326 | 183.0 | 0.129 | 0.0222 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 34.12 | 0.0579 | 0.0716 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 64 | 1029_16G | chr4 | 53399 | 190174838 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 17767 | 2329 | 0.0524 | 0.0441 | 0.5395 | 171.5 | 0.1561 | 0.0329 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 46.11 | 0.0524 | 0.0974 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 65 | 1029_16G | chr5 | 113220 | 181260807 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 19925 | 2297 | 0.0427 | 0.036 | 0.5394 | 178.0 | 0.1559 | 0.0302 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 41.15 | 0.0427 | 0.0981 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 66 | 1029_16G | chr6 | 304553 | 29729374 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 3428 | 500 | 0.0421 | 0.0399 | 0.5296 | 205.0 | 0.1173 | 0.0199 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 15.8 | 0.0421 | 0.0628 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 67 | 1029_16G | chr6 | 29738095 | 29941562 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 32 | 46 | -0.0655 | -0.0263 | 0.5286 | 2297.0 | 0.114 | 0.0149 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 3.65 | -0.0655 | 0.0979 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 68 | 1029_16G | chr6 | 29941492 | 29945744 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 50 | 44 | 0.1758 | 0.1046 | 0.5921 | 3803.5 | 0.3714 | 0.1284 | 6 | 0 | amp | 1 | 0.0684 | 1.0 | 0.0684 | 1 | -0.04 | 12.83 | -0.0092 | -0.0053 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 69 | 1029_16G | chr6 | 29945675 | 30061602 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 26 | 58 | 0.0746 | 0.0349 | 0.5514 | 4903.5 | 0.2043 | 0.0324 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 6.93 | 0.0746 | 0.1949 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 70 | 1029_16G | chr6 | 30061577 | 31269285 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 694 | 169 | -0.0038 | -0.0065 | 0.5425 | 304.0 | 0.1682 | 0.0347 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 7.18 | -0.0038 | 0.1246 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 71 | 1029_16G | chr6 | 31269484 | 31365820 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 53 | 59 | -0.161 | -0.076 | 0.5971 | 557.0 | 0.388 | 0.1593 | 1 | 0 | del | 1 | 0.2869 | 1.0 | 0.2869 | 1 | -0.04 | 14.01 | 0.0624 | 0.0214 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 72 | 1029_16G | chr6 | 31365820 | 32223962 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 1200 | 72 | 0.03 | 0.0203 | 0.5184 | 1102.0 | 0.0728 | 0.0077 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 6.4 | 0.03 | 0.0496 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 73 | 1029_16G | chr6 | 32223962 | 32445089 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 79 | 87 | -0.0227 | -0.0093 | 0.5562 | 204.3 | 0.2216 | 0.0742 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 7.1 | -0.0227 | 0.1699 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 74 | 1029_16G | chr6 | 32521860 | 32660038 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 35 | 76 | -0.0604 | -0.0991 | 0.6117 | 1671.0 | 0.4498 | 0.2016 | 2 | 0 | cn-loh | 1 | 0.1965 | 1.0 | 0.1965 | 1 | -0.04 | 16.87 | -0.0604 | 0.0368 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 75 | 1029_16G | chr6 | 32660038 | 32660302 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 4 | 17 | 0.2046 | 0.2032 | 0.67 | 1726.0 | 0.7058 | 0.5018 | 4 | 0 | amp | 1 | 0.1965 | 1.0 | 0.1965 | 1 | -0.04 | 12.77 | -0.0542 | 0.0068 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 76 | 1029_16G | chr6 | 32660811 | 32662078 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 4 | 30 | 0.0709 | 0.0291 | 0.5308 | 851.7 | 0.1225 | 0.0205 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 2.47 | 0.0709 | 0.096 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 77 | 1029_16G | chr6 | 32662119 | 32665064 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 4 | 12 | -0.5126 | -0.6158 | 0.6439 | 2180.0 | 0.5912 | 0.3419 | 1 | 0 | del | 1 | 0.4734 | 1.0 | 0.4734 | 1 | -0.04 | 10.67 | -0.1229 | -0.0661 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 78 | 1029_16G | chr6 | 32664991 | 32666712 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 4 | 27 | -0.1479 | -0.265 | 0.5644 | 919.5 | 0.2553 | 0.0735 | 1 | 0 | del | 1 | 0.1965 | 1.0 | 0.1965 | 1 | -0.04 | 5.61 | 0.0013 | 0.014 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 79 | 1029_16G | chr6 | 32741338 | 170584636 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 18310 | 2415 | 0.0431 | 0.0336 | 0.5274 | 199.2 | 0.1086 | 0.0169 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 36.26 | 0.0431 | 0.0532 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 80 | 1029_16G | chr7 | 193154 | 159144810 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 21489 | 2985 | 0.049 | 0.0416 | 0.5373 | 207.0 | 0.1467 | 0.038 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 48.03 | 0.049 | 0.094 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 81 | 1029_16G | chr8 | 166190 | 145054212 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 16658 | 2177 | 0.0498 | 0.041 | 0.5316 | 197.0 | 0.1249 | 0.0254 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 40.52 | 0.0498 | 0.0697 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 82 | 1029_16G | chr9 | 15056 | 136494638 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 17318 | 2068 | 0.0386 | 0.0298 | 0.5329 | 193.8 | 0.1297 | 0.0269 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 33.47 | 0.0386 | 0.0745 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 83 | 1029_16G | chr9 | 136494578 | 136508435 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 203 | 14 | 0.2544 | 0.2649 | 0.5129 | 2326.5 | 0.0515 | 0.0021 | 4 | 2 | amp | 1 | 0.1965 | 1.0 | 0.1965 | 1 | -0.04 | 21.38 | -0.0044 | 0.0351 | False | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 84 | 1029_16G | chr9 | 136508830 | 138231128 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 1201 | 156 | 0.0569 | 0.0479 | 0.5222 | 316.0 | 0.0885 | 0.0097 | 2 | 1 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 11.87 | 0.0569 | 0.044 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |
| 85 | 1029_16G | chrX | 2853959 | 155545278 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 15570 | 0 | -0.9412 | -0.9553 | 1 | 0 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 692.33 | 0.0588 | 0.0 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | |||||
| 86 | 1029_16G | chrY | 2786997 | 20779689 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 | 316 | 0 | -0.8667 | -0.8979 | 1 | 0 | neutral | 1 | 1.0 | 1.0 | 1.0 | 1 | -0.04 | 90.82 | 0.1333 | 0.0 | True | blood | B23KFCWLT4 | 1029_16G-N1-BDNA-1_B23KGCJLT4_1 |
87 rows