File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/666f05dc4a5788809c3af6a28ea7c7/.command.log
Size
947 bytes
Task
SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (1029_01S-N1-BDNA-1_B23KGCJLT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/666f05dc4a5788809c3af6a28ea7c7/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/e31bb91d03e8f78e9f62fb045578f4/norm_reference/sex_calls.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/666f05dc4a5788809c3af6a28ea7c7/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/9846c39d63367d3f153d8b004282bb/1029_01S-N1-BDNA-1_B23KGCJLT4_1_probes.tsv.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/e31bb91d03e8f78e9f62fb045578f4/norm_reference/batch_reference.parquet
==> STAGING COMPLETE (5 inputs)

Loaded 472,386 probes for 1029_01S-N1-BDNA-1_B23KGCJLT4_1
  Sex homology mask: 1494 probes set to mask=2
  5-feature GAM: R²=0.9648
  Wrote 1029_01S-N1-BDNA-1_B23KGCJLT4_1_normalized.parquet
  Wrote feature stats to 1029_01S-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
  Done in 13.7s