File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/0e14220bc8ca7f0bf65a83da4f7300/.command.log
Size
947 bytes
Task
SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (1029_01S-T1-TDNA-1_B23KFCWLT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/0e14220bc8ca7f0bf65a83da4f7300/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/7492cb2c6d8ca8f5afc6b1e0f18450/norm_reference/sex_calls.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/0e14220bc8ca7f0bf65a83da4f7300/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/c1940ca89c3b614deeedf8be72cfdb/1029_01S-T1-TDNA-1_B23KFCWLT4_1_probes.tsv.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/7492cb2c6d8ca8f5afc6b1e0f18450/norm_reference/batch_reference.parquet
==> STAGING COMPLETE (5 inputs)

Loaded 472,386 probes for 1029_01S-T1-TDNA-1_B23KFCWLT4_1
  Sex homology mask: 1494 probes set to mask=2
  5-feature GAM: R²=0.9059
  Wrote 1029_01S-T1-TDNA-1_B23KFCWLT4_1_normalized.parquet
  Wrote feature stats to 1029_01S-T1-TDNA-1_B23KFCWLT4_1_gam_stats.json
  Done in 17.5s