.command.log - Workdir - SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (1029_11H-N1-BDNA-1_B23KGCJLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/d0dd95f572f6df701640db8ff2992f/.command.log
Size: 846 bytes
Task: SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (1029_11H-N1-BDNA-1_B23KGCJLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/d0dd95f572f6df701640db8ff2992f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/a41fadaa91834fe5489fb14457bd9d/1029_11H-N1-BDNA-1_B23KGCJLT4_1_probes.tsv.gz
  Downloading: s3://ai-pipelines-experiment/chnobles/test_clean/results/norm_reference/sex_calls.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/d0dd95f572f6df701640db8ff2992f/.command.run
  Downloading: s3://ai-pipelines-experiment/chnobles/test_clean/results/norm_reference/batch_reference.parquet
==> STAGING COMPLETE (5 inputs)

Loaded 472,386 probes for 1029_11H-N1-BDNA-1_B23KGCJLT4_1
  5-feature GAM: R²=0.9678
  Wrote 1029_11H-N1-BDNA-1_B23KGCJLT4_1_normalized.parquet
  Wrote feature stats to 1029_11H-N1-BDNA-1_B23KGCJLT4_1_gam_stats.json
  Done in 26.9s