Error executing process > 'NGSCHECKMATE_NCM (1)'

Caused by:
  Process `NGSCHECKMATE_NCM (1)` terminated with an error exit status (1)


Command executed:

  if true
  then
      for VCFGZ in *.vcf.gz; do
          gunzip -cdf $VCFGZ > $( basename $VCFGZ .gz );
      done
  fi
  
  NCM_REF="./"Homo_sapiens_assembly38.fasta ncm.py -d . -bed ngscheckmate_snps_hg38_full.bed -O . -N ngscheckmate_snps_hg38 -V
  
  if true
  then
      rm -f *.vcf  # clean up decompressed vcfs
  fi
  
  cat <<-END_VERSIONS > versions.yml
  "NGSCHECKMATE_NCM":
      ngscheckmate: $(ncm.py --help | sed "7!d;s/ *Ensuring Sample Identity v//g")
  END_VERSIONS

Command exit status:
  1

Command output:
  Set the path to your reference file with the NCM_REF environment variable
  eg. export NCM_REF=/<path>/<to>/<reference>
  
  Generate Data Set from .
  using this bed file : ngscheckmate_snps_hg38_full.bed

Command error:
  Traceback (most recent call last):
    File "/usr/local/NGSCheckMate/ncm.py", line 1464, in <module>
      createDataSetFromDir(base_dir,bedFile)
    File "/usr/local/NGSCheckMate/ncm.py", line 222, in createDataSetFromDir
      real_depth[file] = depth[file] / float(real_count[file])
  ZeroDivisionError: float division by zero

Work dir:
  s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/5958d7cb32bbd4d5fcc8949b021b7c

Container:
  quay.io/biocontainers/ngscheckmate:1.0.1--py27pl5321r40hdfd78af_1

Tip: when you have fixed the problem you can continue the execution adding the option `-resume` to the run command line