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869_IYA-T1-TDNA-1_A23FG3YLT4_1_vs_869_IYA-N1-BDNA-1_A23FG3YLT4_1.segments.csv
Full Path
s3://natera-platform-sandbox/platform-users/chnobles/cgp_runs/cgp_dna_exp0021/20260113_LH00527_0046_A23FG3YLT4_tools_recal_facets__315a930f--20260304-023801/variant_calling/facets/869_IYA-T1-TDNA-1_A23FG3YLT4_1_vs_869_IYA-N1-BDNA-1_A23FG3YLT4_1/869_IYA-T1-TDNA-1_A23FG3YLT4_1_vs_869_IYA-N1-BDNA-1_A23FG3YLT4_1.segments.csv
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35.2 KB
Workflow Run
nobles_exp021_facets_update_02
Published
Mar 03, 2026 8:09 PM

Content

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chrom seg num.mark nhet cnlr.median mafR segclust cnlr.median.clust mafR.clust start end cf.em tcn.em lcn.em
1 1 1 1923 197 -0.0450950320068184 -0.00358498212737425 35 -0.00545912996031514 -0.000171160106972447 14653 6199353 1 2 1
2 1 2 11007 1208 -0.00555294569007209 0.0016536260052125 35 -0.00545912996031514 -0.000171160106972447 6199607 40202606 1 2 1
3 1 3 16 2 -1.08583805017654 0.0204553565869343 9 -1.10249855992765 NA 40222446 40238944 0.48600784235872 0 0
4 1 4 5969 573 0.00511053469982037 -0.00035260243408084 35 -0.00545912996031514 -0.000171160106972447 40239099 68243043 1 2 1
5 1 5 2186 206 -0.116533410413244 0.00123681597079037 31 -0.117949137349464 0.00198473740781694 68275695 89008749 1 2 1
6 1 6 259 31 0.363126786977592 0.000545176729049513 53 0.363126786977592 0.000545176729049513 89009080 90018955 0.223159240907664 4 2
7 1 7 1118 107 -0.0066141096554084 0.0137436366928442 38 -0.00545912996031514 0.0145357680624715 90020853 97098919 1 2 1
8 1 8 14 1 0.935974339592922 0.16298154823303 58 0.959334497884343 NA 97192839 97306672 0.483268840203345 6 NA
9 1 9 34 1 0.0576236276885138 0.0183972446840758 46 0.0570402110555093 NA 97309331 97593743 NA 2 NA
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11 1 11 473 34 0.020809982924886 0.0206420408750097 38 -0.00545912996031514 0.0145357680624715 97740348 100941808 1 2 1
12 1 12 3025 283 -0.496974681001398 0.682625988578055 18 -0.496803409606278 0.682625988578055 100961827 117466608 0.48600784235872 1 0
13 1 13 8857 711 0.0237552622515927 0.000821521741886388 35 -0.00545912996031514 -0.000171160106972447 117493011 166989955 1 2 1
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18 1 18 371 52 -0.374115876468248 0.00129439831412818 21 -0.354049126058688 -0.000680789326672301 193249440 197144028 0.238512237175765 0 0
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20 1 20 16 1 0.885544885154093 0.0368265108140622 57 0.9032255236124 NA 243126416 243164434 0.483268840203345 6 NA
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22 2 22 7646 749 -0.0111622904907919 -0.000348521005281478 35 -0.00545912996031514 -0.000171160106972447 41366 47805734 1 2 1
23 2 23 10 1 -1.00676176726167 0.00445792318659593 12 -0.982408140708651 NA 47806038 47808468 0.478670995734565 0 0
24 2 24 7094 722 -0.00807986189886965 0.00439019436178867 36 -0.00545912996031514 0.00379706066819886 47808684 97164655 1 2 1
25 2 25 12 3 -1.30118064564804 -0.0239641408046969 5 -1.31177347731518 NA 97167368 97183550 0.48600784235872 0 0
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31 2 31 16 2 -0.700218641387691 0.0145369490251994 16 -0.700218641387691 NA 108452616 108473115 0.381818084064281 0 0
32 2 32 3302 466 -0.0358809389826737 0.00532022184902271 37 -0.00545912996031514 0.00748555444531248 108475567 131420018 1 2 1
33 2 33 12 0 -1.1524038819368 0 8 -1.17992396033461 NA 131420417 131423501 0.48600784235872 0 0
34 2 34 919 43 -0.0356795704350557 0.0204946640659428 38 -0.00545912996031514 0.0145357680624715 131423716 138288820 1 2 1
35 2 35 576 87 -0.413596052823731 0.0271277706179661 20 -0.413596052823731 0.0271277706179661 138290412 148446602 0.21175779489371 0 0
36 2 36 287 20 0.0308622566407699 0.00367831272135673 36 -0.00545912996031514 0.00379706066819886 148458897 151462432 1 2 1
37 2 37 20 0 -0.953232217569671 0 12 -0.982408140708651 NA 151462880 151469882 0.478670995734565 0 0
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39 2 39 11 0 -1.25457913458357 0 6 -1.26735267771435 NA 167244139 167246726 0.48600784235872 0 0
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45 2 45 325 30 0.0278249223518775 0.00940034773621692 37 -0.00545912996031514 0.00748555444531248 178753214 181480646 1 2 1
46 2 46 48 9 0.279603663246694 0.000479396481084238 52 0.310335450507422 NA 181481399 181532083 0.103506745090582 5 NA
47 2 47 367 58 -0.0964088309498799 -0.0100643984016415 31 -0.117949137349464 0.00198473740781694 181534066 185744581 1 2 1
48 2 48 116 6 -0.988583409689723 -0.00578881631286676 12 -0.982408140708651 NA 185745439 186313834 0.478670995734565 0 0
49 2 49 10876 1050 -0.000589586819249394 0.00776642733375124 37 -0.00545912996031514 0.00748555444531248 186314764 242122433 1 2 1
50 3 50 89 12 -0.116899480150075 -0.00852290932654003 32 -0.117949137349464 NA 51395 1327482 NA 2 NA
51 3 51 28 5 -1.1078234647473 -0.0428505475447401 9 -1.10249855992765 NA 1327720 1403462 0.48600784235872 0 0
52 3 52 3294 328 -0.00161796691847538 0.00621701442976641 37 -0.00545912996031514 0.00748555444531248 1403599 17380068 1 2 1
53 3 53 12 3 -1.06320128506113 0.196086418008699 11 -1.03853334072704 NA 17383941 17508579 0.48600784235872 0 0
54 3 54 1847 183 0.00439139455597054 6.66648933252104e-05 36 -0.00545912996031514 0.00379706066819886 17648935 37319208 1 2 1
55 3 55 25 0 -1.09110014530355 0 9 -1.10249855992765 NA 37321766 37335236 0.48600784235872 0 0
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57 3 57 25 0 -0.661622154826976 0 17 -0.656052065553346 NA 56617052 56628592 0.358280934616491 0 0
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295 rows