|
aborted
|
NFCORE_SAREK:PREPARE_INTERVALS:CREATE_INTERVALS_BED (wgs_calling_regions_noseconds.hg38.bed)
|
- |
14m 51s |
- |
- |
- |
- |
- |
- |
- |
- |
1 |
|
aborted
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_COMBINED (wgs_calling_regions_noseconds.hg38;null)
|
- |
7m 52s |
- |
- |
- |
- |
- |
- |
- |
- |
1 |
|
aborted
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
- |
14m 52s |
- |
- |
- |
- |
- |
- |
- |
- |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_91-N1-BDNA-1_A23FG3YLT4_1)
|
4m 7s |
1m 58s |
- |
- |
14.9 MB |
121% |
5.2 MB |
110.5 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_b6L-N1-BDNA-1_A23FG3YLT4_1)
|
4m 4s |
1m 10s |
- |
- |
11.8 MB |
95% |
5.2 MB |
110.7 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bD1-N1-BDNA-1_A23FG3YLT4_1)
|
4m 0s |
1m 57s |
- |
- |
15.2 MB |
95% |
5.2 MB |
110.5 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bHx-N1-BDNA-1_A23FG3YLT4_1)
|
4m 43s |
1m 10s |
- |
- |
17.1 MB |
129% |
5.4 MB |
111.1 KB |
5.2 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bmI-N1-BDNA-1_A23FG3YLT4_1)
|
4m 34s |
2m 30s |
- |
- |
17.4 MB |
123% |
5.3 MB |
110.9 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bPW-N1-BDNA-1_A23FG3YLT4_1)
|
4m 50s |
2m 21s |
- |
- |
14.4 MB |
104% |
5.4 MB |
110.9 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_btT-N1-BDNA-1_A23FG3YLT4_1)
|
3m 11s |
1m 4s |
- |
- |
15.0 MB |
118% |
5.2 MB |
110.7 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bu4-N1-BDNA-1_A23FG3YLT4_1)
|
3m 47s |
1m 17s |
- |
- |
14.5 MB |
114% |
5.4 MB |
111.0 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_c6S-N1-BDNA-1_A23FG3YLT4_1)
|
4m 23s |
1m 16s |
- |
- |
14.8 MB |
109% |
5.4 MB |
111.0 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_csY-N1-BDNA-1_A23FG3YLT4_1)
|
4m 0s |
1m 16s |
- |
- |
17.4 MB |
117% |
5.3 MB |
110.7 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_esc-N1-BDNA-1_A23FG3YLT4_1)
|
4m 34s |
1m 13s |
- |
- |
15.0 MB |
108% |
5.4 MB |
110.8 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_eZ3-N1-BDNA-1_A23FG3YLT4_1)
|
4m 39s |
1m 14s |
- |
- |
13.8 MB |
126% |
5.3 MB |
110.6 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_QC-N1-BDNA-1_A23FG3YLT4_1)
|
4m 45s |
1m 57s |
- |
- |
17.3 MB |
107% |
5.4 MB |
111.0 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_sv-N1-BDNA-1_A23FG3YLT4_1)
|
5m 7s |
2m 13s |
- |
- |
16.8 MB |
105% |
5.2 MB |
110.5 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (869_B0C-N1-BDNA-1_A23FG3YLT4_1)
|
4m 57s |
2m 12s |
- |
- |
15.5 MB |
108% |
5.3 MB |
110.8 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (869_B0O-N1-BDNA-1_A23FG3YLT4_1)
|
4m 7s |
1m 58s |
- |
- |
16.9 MB |
115% |
5.4 MB |
110.8 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (869_B8Q-N1-BDNA-1_A23FG3YLT4_1)
|
3m 30s |
1m 59s |
1s |
1m 30s |
15.7 MB |
118% |
5.3 MB |
110.7 KB |
5.0 MB |
116.0 KB |
1 |