NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_b6L-N1-BDNA-1_A23FG3YLT4_1) - nobles_exp021_facets_update_05 - Workflow Tracker

Runs
nobles_exp02..s_update_05
Tasks
BAM_ESTIMATE_SEX_NORMAL (659_b6L-N1-BDNA-1_A23FG3YLT4_1)

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Task Info

Status: succeeded
Hash: e0f0e8a52c7a
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL
Tag: 659_b6L-N1-BDNA-1_A23FG3YLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 7e/cdd048
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/cdd0488d9341d0fce9058cc8d1bf99
Native ID: nf-7ecdd0488d9341d0fce9058cc8d1bf99-0ac4c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 1
Memory (peak / alloc): 16.4 MB / 1.0 GB
Process I/O (rchar / wchar): 5.2 MB / 110.7 KB
Disk I/O (read / write): 5.0 MB / 116.0 KB
Host: i-0396283dd3bd37f7a ( on-demand)

Runtime

Submitted: Mar 04, 2026 10:07:45 AM
Completed: Mar 04, 2026 10:10:01 AM
Total Duration: 2m 15s

Phases

Queue: 3s
Execution: 1s
Stage/Unstage: 2m 11s

Attempt 1

Execution

Status: aborted
Hash: 3d/aad5cb
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/aad5cb637774fe84dc66d819134b74
Native ID: nf-3daad5cb637774fe84dc66d819134b74-b15dd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 1
Memory (peak / alloc): - / 1.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -

Runtime

Submitted: Mar 04, 2026 9:30:53 AM
Completed: Mar 04, 2026 10:07:45 AM
Total Duration: -

Phases

Queue: 2357h 12m
Execution: -
Stage/Unstage: -