|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr8_85714223-145078636;null)
|
5s |
3s |
- |
- |
3.1 MB |
95% |
109.8 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr9_10001-41225986;null)
|
4s |
3s |
- |
- |
3.1 MB |
133% |
110.7 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr9_134185537-138334717;null)
|
5s |
4s |
- |
- |
3.3 MB |
134% |
110.6 KB |
3.5 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr9_43282957-43332174;null)
|
4s |
3s |
- |
- |
3.2 MB |
112% |
103.5 KB |
3.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_116595567-120879381;null)
|
4s |
3s |
- |
- |
3.3 MB |
120% |
110.6 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_144475607-156030895;null)
|
5s |
3s |
- |
- |
3.3 MB |
126% |
102.8 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_37285838-49348394;null)
|
4s |
3s |
- |
- |
3.2 MB |
63% |
110.6 KB |
3.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_49528395-50228964;null)
|
5s |
3s |
- |
- |
3.1 MB |
126% |
102.8 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrX_62462543-114281198;null)
|
4s |
3s |
- |
- |
3.2 MB |
105% |
105.2 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrY_20257794-21739542;null)
|
4s |
2s |
- |
- |
3.3 MB |
126% |
103.0 KB |
3.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chrY_2781480-9046914;null)
|
4s |
3s |
- |
- |
3.2 MB |
119% |
103.9 KB |
3.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
6s |
5s |
0s |
0s |
0 bytes |
203% |
112.1 KB |
39.7 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
27s |
21s |
0s |
5s |
16.8 MB |
98% |
3.4 MB |
67.4 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_91-N1-BDNA-1_A23FG3YLT4_1)
|
2m 3s |
3s |
- |
- |
18.3 MB |
83% |
5.2 MB |
110.5 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_b6L-N1-BDNA-1_A23FG3YLT4_1)
|
1m 58s |
4s |
- |
- |
18.2 MB |
104% |
5.2 MB |
110.7 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bD1-N1-BDNA-1_A23FG3YLT4_1)
|
2m 4s |
3s |
- |
- |
16.9 MB |
88% |
5.2 MB |
110.6 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bHx-N1-BDNA-1_A23FG3YLT4_1)
|
2m 56s |
3s |
- |
- |
18.0 MB |
88% |
5.4 MB |
111.1 KB |
5.2 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bmI-N1-BDNA-1_A23FG3YLT4_1)
|
2m 23s |
2s |
- |
- |
15.2 MB |
90% |
5.3 MB |
110.9 KB |
5.0 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_bPW-N1-BDNA-1_A23FG3YLT4_1)
|
2m 44s |
3s |
- |
- |
14.8 MB |
98% |
5.4 MB |
110.9 KB |
5.1 MB |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (659_btT-N1-BDNA-1_A23FG3YLT4_1)
|
2m 3s |
4s |
- |
- |
14.9 MB |
127% |
5.2 MB |
110.7 KB |
4.9 MB |
116.0 KB |
1 |